FFCP PHASE1:Hg19::chr19:51563274..51563287,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:51563274..51563287,-
|short_description=p@chr19:51563274..51563287,-
|description=CAGE_peak_at_chr19:51563274..51563287,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:51563274..51563287,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr19:51563274..51563287,- | |||
|id=chr19:51563274..51563287,- | |||
|ontology_enrichment_celltype=CL:0000319!6.38e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.67e-23;1!UBERON:0008814;1.48e-12;2!UBERON:0010056;1.48e-12;2 | |||
|ontology_enrichment_disease=DOID:3030!6.38e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!2.18e-18!3;UBERON:0001033!2.18e-18!3;UBERON:0010056!2.18e-18!3;UBERON:0001042!1.20e-09!10;UBERON:0009145!1.20e-09!10;UBERON:0000166!2.26e-09!21;UBERON:0006562!8.97e-09!11;UBERON:0003135!1.80e-08!11;UBERON:0002372!2.82e-07!1;UBERON:0001961!2.82e-07!1;UBERON:0001744!2.82e-07!1;UBERON:0001735!2.82e-07!1;UBERON:0000161!3.84e-07!35;UBERON:0000989!4.51e-07!1;UBERON:0008811!4.51e-07!1;UBERON:0006258!4.51e-07!1;UBERON:0005876!4.51e-07!1;UBERON:0004874!4.51e-07!1;UBERON:0000473!6.18e-07!8;UBERON:0006834!6.76e-07!1;UBERON:0000165!7.07e-07!28;UBERON:0000930!7.07e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.47e-30;3!UBERON:0001033;1.47e-30;3!UBERON:0002372;4.59e-23;1!UBERON:0005795;4.59e-23;1!UBERON:0001961;4.59e-23;1!UBERON:0001744;4.59e-23;1!UBERON:0001042;4.59e-23;1!UBERON:0001735;4.59e-23;1!UBERON:0000341;1.65e-12;2!UBERON:0003127;3.06e-12;2!UBERON:0006562;3.06e-12;2!UBERON:0001043;9.66e-09;3!UBERON:0000165;9.11e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.47e-30,3;UBERON:0001033,1.47e-30,3;UBERON:0010056,1.47e-30,3;UBERON:0002372,3.28e-23,1;UBERON:0001961,3.28e-23,1;UBERON:0001744,3.28e-23,1;UBERON:0001735,3.28e-23,1;UBERON:0001042,1.37e-20,10;UBERON:0009145,1.37e-20,10;UBERON:0006562,8.66e-19,11;UBERON:0000341,1.65e-12,2;UBERON:0003127,2.90e-12,2;UBERON:0001557,3.55e-11,19;UBERON:0000166,9.69e-10,22;UBERON:0001043,9.66e-09,3;UBERON:0009143,9.66e-09,3;UBERON:0000072,6.51e-08,47;UBERON:0000165,1.56e-07,29;UBERON:0000930,1.56e-07,29;UBERON:0007023,5.71e-07,114;UBERON:0000065,6.31e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,2.00070672109872,0,0,0,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,12.9965282094482,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,1.50424523575425,0,0.535928260312357,0,0,13.6469748416628,0,0,0,0,0,0,23.0779752770779,3.42233301085281,1.81850543139386,1.79305513481691,0,0,0,0,0,0,0.244482888365733,1.62758471326295,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,2.00070672109872,0,0,0,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,12.9965282094482,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,1.50424523575425,0,0.535928260312357,0,0,13.6469748416628,0,0,0,0,0,0,23.0779752770779,3.42233301085281,1.81850543139386,1.79305513481691,0,0,0,0,0,0,0.244482888365733,1.62758471326295,0,0,0 | ||
|short_description=p@chr19:51563274..51563287,- | |||
}} | }} |
Latest revision as of 16:38, 27 July 2015
Short description: | p@chr19:51563274..51563287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51563274..51563287, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.47e-30 | 3 |
gustatory system | 1.47e-30 | 3 |
future tongue | 1.47e-30 | 3 |
tonsil | 3.28e-23 | 1 |
mucosa-associated lymphoid tissue | 3.28e-23 | 1 |
lymphoid tissue | 3.28e-23 | 1 |
tonsillar ring | 3.28e-23 | 1 |
chordate pharynx | 1.37e-20 | 10 |
pharyngeal region of foregut | 1.37e-20 | 10 |
pharynx | 8.66e-19 | 11 |
throat | 1.65e-12 | 2 |
open tracheal system trachea | 2.90e-12 | 2 |
upper respiratory tract | 3.55e-11 | 19 |
oral opening | 9.69e-10 | 22 |
esophagus | 9.66e-09 | 3 |
esophageal region | 9.66e-09 | 3 |
segment of respiratory tract | 6.51e-08 | 47 |
mouth | 1.56e-07 | 29 |
stomodeum | 1.56e-07 | 29 |
adult organism | 5.71e-07 | 114 |
respiratory tract | 6.31e-07 | 54 |