FFCP PHASE1:Hg19::chr19:7754133..7754146,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:7754133..7754146,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr19:7754133..7754146,- | |description=CAGE_peak_at_chr19:7754133..7754146,- | ||
|id=chr19:7754133..7754146,- | |id=chr19:7754133..7754146,- | ||
|ontology_enrichment_celltype=CL:0000945!4.99e-48!24;CL:0000826!4.99e-48!24;CL:0000236!4.00e-27!14;CL:0000838!8.12e-24!52;CL:0000542!2.62e-23!53;CL:0000051!2.62e-23!53;CL:0002087!2.24e-20!119;CL:0002031!1.79e-17!124;CL:0000738!1.16e-16!140;CL:0000037!3.99e-14!172;CL:0000566!3.99e-14!172;CL:0002032!1.91e-13!165;CL:0000837!1.91e-13!165;CL:0000785!3.83e-13!2;CL:0000955!3.83e-13!2;CL:0000818!3.83e-13!2;CL:0000954!3.83e-13!2;CL:0000816!3.83e-13!2;CL:0000988!4.27e-13!182;CL:0000840!6.64e-10!5;CL:0001029!6.64e-10!5;CL:0000817!4.68e-09!3;CL:0000946!9.10e-08!1;CL:0000786!9.10e-08!1;CL:0000980!9.10e-08!1;CL:0000819!4.61e-07!1;CL:0000990!9.57e-07!8 | |ontology_enrichment_celltype=CL:0000945!4.99e-48!24;CL:0000826!4.99e-48!24;CL:0000236!4.00e-27!14;CL:0000838!8.12e-24!52;CL:0000542!2.62e-23!53;CL:0000051!2.62e-23!53;CL:0002087!2.24e-20!119;CL:0002031!1.79e-17!124;CL:0000738!1.16e-16!140;CL:0000037!3.99e-14!172;CL:0000566!3.99e-14!172;CL:0002032!1.91e-13!165;CL:0000837!1.91e-13!165;CL:0000785!3.83e-13!2;CL:0000955!3.83e-13!2;CL:0000818!3.83e-13!2;CL:0000954!3.83e-13!2;CL:0000816!3.83e-13!2;CL:0000988!4.27e-13!182;CL:0000840!6.64e-10!5;CL:0001029!6.64e-10!5;CL:0000817!4.68e-09!3;CL:0000946!9.10e-08!1;CL:0000786!9.10e-08!1;CL:0000980!9.10e-08!1;CL:0000819!4.61e-07!1;CL:0000990!9.57e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.26e-40;24!CL:0000946;5.71e-21;1!CL:0000786;5.71e-21;1!CL:0000542;3.45e-09;53!CL:0000236;5.26e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.99e-40,24;CL:0000826,2.99e-40,24;CL:0000946,4.22e-21,1;CL:0000786,4.22e-21,1;CL:0000980,4.22e-21,1;CL:0000838,1.52e-18,52;CL:0000542,3.43e-18,53;CL:0000051,3.43e-18,53;CL:0002087,1.83e-13,115;CL:0000236,2.45e-13,14;CL:0002031,6.87e-13,120;CL:0000738,2.48e-11,136;CL:0000785,3.02e-11,2;CL:0000955,3.02e-11,2;CL:0000818,3.02e-11,2;CL:0000954,3.02e-11,2;CL:0000816,3.02e-11,2;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,4.31e-09,168;CL:0000988,1.32e-08,177;CL:0000817,6.34e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000954;3.52e-11;2!CL:0000051;3.45e-09;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.04e-10!10;DOID:630!7.03e-08!1;DOID:0050177!7.03e-08!1;DOID:0050427!7.03e-08!1;DOID:2355!2.50e-07!1;DOID:0060073!4.61e-07!1;DOID:8675!4.61e-07!1 | |ontology_enrichment_disease=DOID:0060058!8.04e-10!10;DOID:630!7.03e-08!1;DOID:0050177!7.03e-08!1;DOID:0050427!7.03e-08!1;DOID:2355!2.50e-07!1;DOID:0060073!4.61e-07!1;DOID:8675!4.61e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:630;2.30e-21;1!DOID:0050177;2.30e-21;1!DOID:0050427;2.30e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.88e-21,1;DOID:0050177,1.88e-21,1;DOID:0050427,1.88e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!6.22e-09!3;UBERON:0004854!6.22e-09!3;UBERON:0009034!6.22e-09!3;UBERON:0002095!6.22e-09!3;UBERON:0004782!6.22e-09!3;UBERON:0003281!6.22e-09!3;UBERON:0009664!6.22e-09!3;UBERON:0002296!6.22e-09!3;UBERON:0005602!6.22e-09!3;UBERON:0001179!6.22e-09!3;UBERON:0006293!6.22e-09!3;UBERON:0001301!2.66e-07!1;UBERON:0001154!3.01e-07!1;UBERON:0001153!3.01e-07!1 | |ontology_enrichment_uberon=UBERON:0002106!6.22e-09!3;UBERON:0004854!6.22e-09!3;UBERON:0009034!6.22e-09!3;UBERON:0002095!6.22e-09!3;UBERON:0004782!6.22e-09!3;UBERON:0003281!6.22e-09!3;UBERON:0009664!6.22e-09!3;UBERON:0002296!6.22e-09!3;UBERON:0005602!6.22e-09!3;UBERON:0001179!6.22e-09!3;UBERON:0006293!6.22e-09!3;UBERON:0001301!2.66e-07!1;UBERON:0001154!3.01e-07!1;UBERON:0001153!3.01e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43860325865781,2.79142004129816,2.67616656466509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,1.5644487552606,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.522389211897802,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.492339221844278,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0.599646935549574,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,2.8851164307291 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43860325865781,2.79142004129816,2.67616656466509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,1.5644487552606,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.522389211897802,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.492339221844278,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0.599646935549574,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,2.8851164307291 | ||
|short_description=p@chr19:7754133..7754146,- | |short_description=p@chr19:7754133..7754146,- | ||
}} | }} |
Latest revision as of 18:30, 27 July 2015
Short description: | p@chr19:7754133..7754146, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:7754133..7754146, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.99e-40 | 24 |
pro-B cell | 2.99e-40 | 24 |
antibody secreting cell | 4.22e-21 | 1 |
plasma cell | 4.22e-21 | 1 |
plasmablast | 4.22e-21 | 1 |
lymphoid lineage restricted progenitor cell | 1.52e-18 | 52 |
lymphocyte | 3.43e-18 | 53 |
common lymphoid progenitor | 3.43e-18 | 53 |
nongranular leukocyte | 1.83e-13 | 115 |
B cell | 2.45e-13 | 14 |
hematopoietic lineage restricted progenitor cell | 6.87e-13 | 120 |
leukocyte | 2.48e-11 | 136 |
mature B cell | 3.02e-11 | 2 |
pre-B-II cell | 3.02e-11 | 2 |
transitional stage B cell | 3.02e-11 | 2 |
small pre-B-II cell | 3.02e-11 | 2 |
immature B cell | 3.02e-11 | 2 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
hematopoietic stem cell | 4.31e-09 | 168 |
hematopoietic cell | 1.32e-08 | 177 |
precursor B cell | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.88e-21 | 1 |
monogenic disease | 1.88e-21 | 1 |
xeroderma pigmentosum | 1.88e-21 | 1 |