FFCP PHASE1:Hg19::chr19:9049725..9049733,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:9049725..9049733,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr19:9049725..9049733,- | |||
|id=chr19:9049725..9049733,- | |||
|ontology_enrichment_celltype=CL:0002150!2.38e-13!3;CL:0000861!2.38e-13!3;CL:0002536!9.39e-10!2;CL:0000349!8.55e-07!3;CL:0002577!8.55e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;5.72e-21;5!CL:1000415;1.46e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,6.01e-21,5;CL:1000415,1.55e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.72e-26;1 | |||
|ontology_enrichment_disease=DOID:305!9.04e-12!106;DOID:0050687!1.29e-08!143;DOID:1749!1.57e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:6193;6.72e-26;1!DOID:3350;1.14e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.62e-26,1;DOID:3350,1.21e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.28e-19!14;UBERON:0000158!2.28e-19!14;UBERON:0000478!1.04e-13!24;UBERON:0005795!1.69e-11!22;UBERON:0000305!9.95e-11!7;UBERON:0001987!2.47e-10!4;UBERON:0004340!2.47e-10!4;UBERON:0003133!2.62e-10!48;UBERON:0003124!2.75e-10!7;UBERON:0003127!8.60e-10!2;UBERON:0004871!2.16e-09!8;UBERON:0000995!2.75e-09!21;UBERON:0003975!8.02e-09!22;UBERON:0005156!5.99e-08!59;UBERON:0000990!5.99e-08!59;UBERON:0003134!7.05e-08!37;UBERON:0000474!7.05e-08!37;UBERON:0004175!1.19e-07!25;UBERON:0003100!5.78e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.75e-15;7!UBERON:0005631;5.28e-11;10!UBERON:0000158;5.28e-11;10!UBERON:0000478;4.92e-10;24!UBERON:0002110;1.74e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.85e-15,7;UBERON:0004871,1.71e-13,8;UBERON:0000478,4.92e-10,24;UBERON:0002110,1.81e-09,3;UBERON:0006242,1.81e-09,3;UBERON:0005631,4.04e-08,14;UBERON:0000158,4.04e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0,11.0577852755724,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0.195984794828755,0,0,2.23581842213102,0.290268993867255,0.219267951258557,0.0821154570532092,0,0,0.677942222341597,0,0,0,1.17330829640882,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5256112259285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87376177821446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1239236337929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.215166616178029,0.665320713092027,0.244209805832924,0,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr19:9049725..9049733,- | |||
}} |
Latest revision as of 18:44, 27 July 2015
Short description: | p@chr19:9049725..9049733, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9049725..9049733, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 6.01e-21 | 5 |
epithelial cell of gall bladder | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.85e-15 | 7 |
somatic layer of lateral plate mesoderm | 1.71e-13 | 8 |
extraembryonic structure | 4.92e-10 | 24 |
gallbladder | 1.81e-09 | 3 |
gall bladder primordium | 1.81e-09 | 3 |
extraembryonic membrane | 4.04e-08 | 14 |
membranous layer | 4.04e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.62e-26 | 1 |
mesenchymal cell neoplasm | 1.21e-13 | 2 |