FFCP PHASE1:Hg19::chr1:103299100..103299144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:103299100..103299144,+ | |||
|coexpression_cluster_id=C289 | |||
|description=CAGE_peak_at_chr1:103299100..103299144,+ | |description=CAGE_peak_at_chr1:103299100..103299144,+ | ||
|id=chr1:103299100..103299144,+ | |id=chr1:103299100..103299144,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.40e-55!3;CL:0002536!2.99e-10!2;CL:0000349!2.19e-07!3;CL:0002577!2.19e-07!3;CL:0000875!3.16e-07!3;CL:0002396!3.16e-07!3 | |ontology_enrichment_celltype=CL:0002541!2.40e-55!3;CL:0002536!2.99e-10!2;CL:0000349!2.19e-07!3;CL:0002577!2.19e-07!3;CL:0000875!3.16e-07!3;CL:0002396!3.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.27e-147;3!CL:0000349;3.83e-42;19!CL:0002577;1.12e-17;3!CL:0000723;7.87e-08;61!CL:0000134;2.40e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.27e-147,3;CL:0000349,3.83e-42,19;CL:0002577,1.12e-17,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!1.05e-64!7;UBERON:0005631!9.39e-63!14;UBERON:0000158!9.39e-63!14;UBERON:0000476!2.40e-55!3;UBERON:0000920!2.40e-55!3;UBERON:0000478!1.35e-36!24;UBERON:0001987!5.15e-19!4;UBERON:0004340!5.15e-19!4;UBERON:0004923!2.68e-15!57;UBERON:0000305!2.98e-11!7;UBERON:0004871!5.80e-10!8 | |ontology_enrichment_uberon=UBERON:0003124!1.05e-64!7;UBERON:0005631!9.39e-63!14;UBERON:0000158!9.39e-63!14;UBERON:0000476!2.40e-55!3;UBERON:0000920!2.40e-55!3;UBERON:0000478!1.35e-36!24;UBERON:0001987!5.15e-19!4;UBERON:0004340!5.15e-19!4;UBERON:0004923!2.68e-15!57;UBERON:0000305!2.98e-11!7;UBERON:0004871!5.80e-10!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.27e-147;3!UBERON:0000920;3.27e-147;3!UBERON:0005631;4.18e-45;10!UBERON:0000158;4.18e-45;10!UBERON:0000478;1.33e-33;24!UBERON:0001987;1.29e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.27e-147,3;UBERON:0003124,3.15e-112,7;UBERON:0005631,9.13e-57,14;UBERON:0000158,9.13e-57,14;UBERON:0000478,1.33e-33,24;UBERON:0001987,1.29e-13,4;UBERON:0004340,1.29e-13,4;UBERON:0004923,7.62e-13,66 | |||
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|short_description=p@chr1:103299100..103299144,+ | |short_description=p@chr1:103299100..103299144,+ | ||
}} | }} |
Latest revision as of 19:04, 27 July 2015
Short description: | p@chr1:103299100..103299144, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:103299100..103299144, + |
Coexpression cluster: | C289_chorionic_skeletal_heart_Mast_amniotic_granulosa_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.27e-147 | 3 |
extraembryonic cell | 3.83e-42 | 19 |
placental epithelial cell | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.27e-147 | 3 |
chorion | 3.15e-112 | 7 |
extraembryonic membrane | 9.13e-57 | 14 |
membranous layer | 9.13e-57 | 14 |
extraembryonic structure | 1.33e-33 | 24 |
placenta | 1.29e-13 | 4 |
allantois | 1.29e-13 | 4 |
organ component layer | 7.62e-13 | 66 |