FFCP PHASE1:Hg19::chr1:10753548..10753555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:10753548..10753555,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr1:10753548..10753555,- | |description=CAGE_peak_at_chr1:10753548..10753555,- | ||
|id=chr1:10753548..10753555,- | |id=chr1:10753548..10753555,- | ||
|ontology_enrichment_celltype=CL:0000738!6.73e-12!140;CL:0002031!3.90e-09!124;CL:0000037!8.46e-09!172;CL:0000566!8.46e-09!172;CL:0000988!6.08e-08!182;CL:0002087!8.56e-08!119;CL:0002032!2.84e-07!165;CL:0000837!2.84e-07!165;CL:0000838!9.42e-07!52 | |ontology_enrichment_celltype=CL:0000738!6.73e-12!140;CL:0002031!3.90e-09!124;CL:0000037!8.46e-09!172;CL:0000566!8.46e-09!172;CL:0000988!6.08e-08!182;CL:0002087!8.56e-08!119;CL:0002032!2.84e-07!165;CL:0000837!2.84e-07!165;CL:0000838!9.42e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000624;9.28e-10;6!CL:0000623;9.60e-09;3!CL:0000791;1.90e-07;18!CL:0000789;1.90e-07;18!CL:0002419;1.90e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.47e-10,136;CL:0000624,7.99e-10,6;CL:0000623,9.68e-09,3;CL:0000825,9.68e-09,3;CL:0000037,3.06e-08,168;CL:0000838,3.82e-08,52;CL:0000542,6.47e-08,53;CL:0000051,6.47e-08,53;CL:0002031,8.56e-08,120;CL:0000791,1.77e-07,18;CL:0000789,1.77e-07,18;CL:0002420,1.77e-07,18;CL:0002419,1.77e-07,18;CL:0000790,1.77e-07,18;CL:0000988,2.16e-07,177;CL:0002087,5.34e-07,115;CL:0002032,5.95e-07,161;CL:0000837,5.95e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.90e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.11e-07;3!UBERON:0000946;3.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.92e-07,3;UBERON:0009751,1.92e-07,3;UBERON:0000946,1.92e-07,3;UBERON:0002523,1.92e-07,3;UBERON:0005983,1.92e-07,3;UBERON:0002165,1.92e-07,3;UBERON:0002062,1.92e-07,3;UBERON:0007280,1.92e-07,3;UBERON:0007023,3.13e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.764134057479513,0,0.550975469195755,0.786728553697808,2.30297638858328,1.39334510984468,0,0,0.739508020333575,0.0774672005803016,0.284338464974843,0,2.21598163412751,6.61796676651468,5.64228263861215,0,0,0.257575567634187,0,0,0,0.464858073811369,0,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0.659702600373432,0.199463657621632,0,0.290209238628584,1.13477044938228,0,1.25624332628372,0,0.217188844705117,1.81619850790011,0,0,0,0.425208599930087,0,0.22465726229299,0.450530678524519,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,2.13365111283254,1.20118796110804,0,0.661044872784862,0,14.2303242277362,7.6340834618222,9.93910393125595,0,1.12101712596307,0.526768169550154,3.73748563216283,13.7553766962208,5.55124047298675,0,0,0.473447805734733,0,0,1.17842362989935,0.221533894583621,1.35401931882508,0.384273959177026,0.780356085359269,0.328875809207352,0.829050053357545,0,0,0,1.04535523804977,0.226618685395132,1.91610246800961,1.03088233644789,0.759059076058509,0.318565414324097,0.651083453856419,0,0.903450714466637,0.127986611154418,0,0.710331756132051,0,8.26587647221403,19.523134292196,12.3100743300379,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.654895377488563,0,0.370784442784429,0,0.174129737299267,0.26591592103773,2.14641561874808,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0.245976877086227,0,0,0,0.201057944823262,0,0,0,0,0.695582429850461,0,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0,0,0.383382679165211,0,0.176096868026452,2.48793738648926,2.01767934783746,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0,0,0,0,0,0,0.112085143993527,8.47232268868287,16.1720681144638,18.0963681154445,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,2.27444828735176,5.39285502046542,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.460404944679482,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0.447749509444357,0.438519753291869,0.784306353074702,0,0,0,0.721287081534056,0.366277859273374,0.330037999682352,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.330569830721956,0.384380134730212,1.27612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,1.13929437434833,0.952927101831156,0.822724546172388,1.94541993357815,1.08006287447623,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,1.05836791361941,0.324621940274555,0,0.456469358066384,0,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.222886768554957,0.852408440419239,0.47748896947538,0,0,0,0,0,0,0.63337622438398,1.39473591775749,1.10513566212459,4.28285671352269,0.511343412510774,0.123084805461069,0,0.179736702294654,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0.524759999977174,0.724999575434793,0,0,1.65471377237555,2.06846023944879,0.583209226766509,0,0,0.482385754501632,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0.557694977114413,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,3.98104772431402,0.973033209536731,0,0.296521128680622,0.247127877893006,0.208843899010911,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0.242780379534093,2.36750641709634,1.20990716048664,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0,0.17472666824203,0,0.19351266257817,0.146178634172371,0.246346371159628,0.193978032976839,0,1.35588444468319,0,0,0,0,0,1.28071796843612,0.19980960958213,0,0.458146384663663,1.54435498075768,0.14405479798815,0,0.471388069233591,0.135904206073614,0,0,0.288950589901519,0,0.273810757783986,0,0,0.262887354279314,1.67569440763353,1.83328339209347,3.58936512288407,1.59743200399193,4.72148652950228,0,1.41085292222125,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0,0.275078873194468,0.415440338029185,1.799791132412,1.5476039091159,0.0607495566580247,1.67717343799633,0.630445658393585,1.04909176269996,0,0.17928733933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| ||
|short_description=p@chr1:10753548..10753555,- | |short_description=p@chr1:10753548..10753555,- | ||
}} | }} |
Latest revision as of 19:09, 27 July 2015
Short description: | p@chr1:10753548..10753555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:10753548..10753555, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.47e-10 | 136 |
CD4-positive, alpha-beta T cell | 7.99e-10 | 6 |
natural killer cell | 9.68e-09 | 3 |
pro-NK cell | 9.68e-09 | 3 |
hematopoietic stem cell | 3.06e-08 | 168 |
lymphoid lineage restricted progenitor cell | 3.82e-08 | 52 |
lymphocyte | 6.47e-08 | 53 |
common lymphoid progenitor | 6.47e-08 | 53 |
hematopoietic lineage restricted progenitor cell | 8.56e-08 | 120 |
mature alpha-beta T cell | 1.77e-07 | 18 |
alpha-beta T cell | 1.77e-07 | 18 |
immature T cell | 1.77e-07 | 18 |
mature T cell | 1.77e-07 | 18 |
immature alpha-beta T cell | 1.77e-07 | 18 |
hematopoietic cell | 2.16e-07 | 177 |
nongranular leukocyte | 5.34e-07 | 115 |
hematopoietic oligopotent progenitor cell | 5.95e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.95e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
valve | 1.92e-07 | 3 |
cardiac mesenchyme | 1.92e-07 | 3 |
cardial valve | 1.92e-07 | 3 |
tunica intima | 1.92e-07 | 3 |
heart layer | 1.92e-07 | 3 |
endocardium | 1.92e-07 | 3 |
endocardial cushion | 1.92e-07 | 3 |
presumptive endocardium | 1.92e-07 | 3 |
adult organism | 3.13e-07 | 114 |