FFCP PHASE1:Hg19::chr1:152975608..152975618,+: Difference between revisions
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|id=chr1:152975608..152975618,+
|short_description=p7@AB587575
|description=CAGE_peak_7_at_AB587575_5end
|association_with_transcript=112bp_to_AB587575_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=112bp_to_AB587575_5end | |||
|cluster_id=chr1:152975608..152975618,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_7_at_AB587575_5end | |||
|id=chr1:152975608..152975618,+ | |||
|ontology_enrichment_celltype=CL:0002537!2.36e-09!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.05e-34;1!UBERON:0008814;7.05e-18;2!UBERON:0010056;7.05e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!2.10e-15!3;UBERON:0001033!2.10e-15!3;UBERON:0010056!2.10e-15!3;UBERON:0000166!1.43e-12!21;UBERON:0002372!4.53e-12!1;UBERON:0001961!4.53e-12!1;UBERON:0001744!4.53e-12!1;UBERON:0001735!4.53e-12!1;UBERON:0006834!1.47e-11!1;UBERON:0000161!1.65e-10!35;UBERON:0001042!2.74e-10!10;UBERON:0009145!2.74e-10!10;UBERON:0000078!1.04e-09!18;UBERON:0000165!2.11e-09!28;UBERON:0000930!2.11e-09!28;UBERON:0006562!2.12e-09!11;UBERON:0005795!8.15e-08!22;UBERON:0001444!1.49e-07!48;UBERON:0005631!3.12e-07!14;UBERON:0000158!3.12e-07!14;UBERON:0000305!6.39e-07!7;UBERON:0000341!8.93e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.09e-44;3!UBERON:0001033;1.09e-44;3!UBERON:0002372;8.34e-34;1!UBERON:0005795;8.34e-34;1!UBERON:0001961;8.34e-34;1!UBERON:0001744;8.34e-34;1!UBERON:0001042;8.34e-34;1!UBERON:0001735;8.34e-34;1!UBERON:0000341;5.48e-18;2!UBERON:0006562;1.17e-17;2!UBERON:0001043;2.19e-12;3!UBERON:0000165;2.37e-11;28!UBERON:0002050;7.25e-08;5!UBERON:0005423;7.25e-08;5!UBERON:0000974;7.17e-07;6!UBERON:0000020;9.81e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.22e-44,3;UBERON:0001033,1.22e-44,3;UBERON:0010056,1.22e-44,3;UBERON:0002372,9.85e-34,1;UBERON:0001961,9.85e-34,1;UBERON:0001744,9.85e-34,1;UBERON:0001735,9.85e-34,1;UBERON:0001042,3.39e-30,10;UBERON:0009145,3.39e-30,10;UBERON:0006562,1.54e-27,11;UBERON:0000341,5.48e-18,2;UBERON:0001557,2.52e-16,19;UBERON:0000166,3.27e-14,22;UBERON:0001043,2.07e-12,3;UBERON:0009143,2.07e-12,3;UBERON:0000165,5.69e-11,29;UBERON:0000930,5.69e-11,29;UBERON:0000153,4.34e-09,62;UBERON:0007811,4.34e-09,62;UBERON:0000161,5.58e-09,36;UBERON:0008814,2.42e-08,18;UBERON:0000072,4.89e-07,47;UBERON:0001444,8.92e-07,49 | |||
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|short_description=p7@AB587575 | |||
}} | }} |
Latest revision as of 21:37, 27 July 2015
Short description: | p7@AB587575 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AB587575_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 112bp_to_AB587575_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.22e-44 | 3 |
gustatory system | 1.22e-44 | 3 |
future tongue | 1.22e-44 | 3 |
tonsil | 9.85e-34 | 1 |
mucosa-associated lymphoid tissue | 9.85e-34 | 1 |
lymphoid tissue | 9.85e-34 | 1 |
tonsillar ring | 9.85e-34 | 1 |
chordate pharynx | 3.39e-30 | 10 |
pharyngeal region of foregut | 3.39e-30 | 10 |
pharynx | 1.54e-27 | 11 |
throat | 5.48e-18 | 2 |
upper respiratory tract | 2.52e-16 | 19 |
oral opening | 3.27e-14 | 22 |
esophagus | 2.07e-12 | 3 |
esophageal region | 2.07e-12 | 3 |
mouth | 5.69e-11 | 29 |
stomodeum | 5.69e-11 | 29 |
anterior region of body | 4.34e-09 | 62 |
craniocervical region | 4.34e-09 | 62 |
orifice | 5.58e-09 | 36 |
pharyngeal arch system | 2.42e-08 | 18 |
segment of respiratory tract | 4.89e-07 | 47 |
subdivision of head | 8.92e-07 | 49 |