FFCP PHASE1:Hg19::chr1:154945096..154945131,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:154945096..154945131,- to FFCP PHASE1:Hg19::chr1:154945096..154945131,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:154945096..154945131,- | |||
|description=CAGE_peak_at_chr1:154945096..154945131,- | |||
|id=chr1:154945096..154945131,- | |||
|ontology_enrichment_celltype=CL:0000066!4.32e-37!254;CL:0002321!4.09e-26!248;CL:0000220!4.61e-25!246;CL:0000076!1.61e-13!62;CL:0000548!2.74e-13!679;CL:0000004!2.74e-13!679;CL:0000255!2.74e-13!679;CL:0000012!1.03e-12!682;CL:0000222!5.47e-12!119;CL:0000223!2.08e-10!59;CL:0000213!2.20e-10!57;CL:0000215!2.20e-10!57;CL:0000003!5.84e-08!722;CL:0000055!3.52e-07!180;CL:0002076!4.15e-07!43;CL:0000115!4.50e-07!35;CL:0002078!9.21e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.75e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.67e-19,253;CL:0002321,1.82e-11,250;CL:0002322,3.73e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.51e-11!106;DOID:0050687!1.39e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.52e-12!312;UBERON:0000483!3.56e-12!309;UBERON:0002100!4.75e-12!216;UBERON:0003104!3.11e-11!238;UBERON:0009142!3.11e-11!238;UBERON:0000490!1.03e-10!138;UBERON:0005256!1.21e-09!143;UBERON:0000475!1.43e-09!365;UBERON:0000481!1.87e-09!347;UBERON:0003914!2.28e-08!118;UBERON:0004119!6.07e-08!169;UBERON:0000925!6.07e-08!169;UBERON:0006595!6.07e-08!169;UBERON:0005177!7.20e-08!107;UBERON:0001048!9.26e-08!168;UBERON:0005911!1.01e-07!82;UBERON:0002049!3.94e-07!79;UBERON:0007798!3.94e-07!79;UBERON:0000468!8.56e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.15e-07,101 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,2.09340350391728,0.873765488520689,0.791300934685361,0.618831764800233,1.65698687863958,0,1.20538905604795,0.730310090387373,0.487932798790507,0.984968464614303,0.408001382488506,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,3.67768489791571,0.90361775633475,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.383587685530591,0.361439152384566,1.50401373190767,0.144846518960824,0,0.486634870302636,0.567208902984407,1.55210578223795,0.527008714158756,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0,0,0,0,1.98762407366705,0,0.694281003215189,0.56530794192401,0.838998872419812,2.20094433552054,1.67195973229448,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,1.83831540172934,0.81014194788176,0.535798369704479,0.22452937262617,0.225222960966644,0,0.949265659568129,0.732806975721629,0,0,1.74437620857014,0,0.25326102332916,0.397227542439656,2.0078563452417,0.709336764396714,1.12135520028461,2.1349799145941,0.24666754841716,0,0.404132016209064,0.326923806226917,0,0.576175924479999,0.234321431833797,0.312160076830321,1.1409436430889,0.149448680551801,0.469737994575059,0.647491777472526,0.702254033511242,0.408308342509787,0.61417158655884,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0,0.375355559615893,0.277064115484183,0,0,0.300476117813194,0.226864366320042,1.4351170855109,0,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.930584281657949,1.18143432568886,0.194874010322397,0.504867548488229,0.184099797284599,0,2.13005755509969,0.604512589365842,0.67824236924195,0.773043412653187,0.818238361772504,0.286804595389004,2.31750041646231,1.59035721985782,1.74290914304278,1.65857688024593,1.00928340350251,0.72995471815166,0,1.28648187638577,2.76269842704961,0,0,0.709840800239063,0,0.964044119533928,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0,1.4763109092493,1.40241773803446,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,0.491953754172454,0.686271241194102,1.42675371031213,3.37205259772859,0.703702806881416,1.01847289674383,0.651616610620649,2.07986957055916,1.44331342025273,0.231860809950154,0.117408694235822,0.866198686566443,0.925971025153221,0.570762456703795,0,0,0,0,0,0,0.671928512795438,0.850650583454319,0.716468181622786,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,1.56983518083505,0,0.7333828582095,0,3.57656445851882,0,0.797814349754612,0,0.514414748524284,0,0,0,1.08524321078289,0,0.65147236858747,1.06617584622764,0.791951872933429,0,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.50051156317903,0,0.415941723061614,0.713715955188647,0.630809660135739,0.585707074963566,0,0,0,0,0.184369168541703,0.434418072340414,0.195801157462741,0.343143423810856,0.206768026122887,0,0.106727557803444,0.303127571446259,0,1.20956117331872,0,0.306923946576125,0,0.128139149255701,0,0,0,0.462629081407967,0,0.164254312027618,0.519254429183621,0.348631135379878,0.725156697549733,1.00253235151642,0.828728900423067,0.34444334449382,0.182091168006717,0.262248829918848,2.70719767744447,0.616122696835318,3.13739907670742,0,0.844413031143006,0,0.510281115829547,0.215915916102139,1.54227252690289,0.270946437543853,1.00337954770971,0.509752546090077,0,0.671624264166535,0,0,0,0.656029291399411,0,0.309123034943167,0.183138929636687,0.41254749960294,0.574265537996172,1.30012049207304,1.6068392984416,0.386682873168488,0.462145851343933,0.307007349452259,0.275673144969061,1.07420244868274,0.580066775656914,0.596586391912706,0,0.661139661443912,1.15314040419064,1.65896526242959,0.50578890427775,0.464845549297286,0.62962469366128,0,1.23213432070436,0,0.869932992075073,0.37064843820784,0.429374660225974,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0.318203247925937,0,0.359744915166629,1.09814811894422,0.589062011728432,0.404364963146632,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.272999822815972,0.565621727814851,0,0.551365343546124,0,0,1.15755106853338,0,0.202910376962704,0.30982349809975,1.12678241012897,0.860468113224309,0,0,2.12856638442359,0.211107635297664,0,2.27683904259429,1.74967360122491,1.53955380360819,0,1.08890984861323,0.282431402330337,1.29151611801369,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.73254089635947,0.242721043499027,0,1.70481688083848,0,0.296964680832639,0,0,0,1.22439575525196,0,0,0,0,0,0,0,0,0.359473404589307,1.43216939740487,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.61221999997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| ||
|short_description=p@chr1:154945096..154945131,- | |||
}} | }} |
Latest revision as of 22:08, 27 July 2015
Short description: | p@chr1:154945096..154945131, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:154945096..154945131, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.67e-19 | 253 |
embryonic cell | 1.82e-11 | 250 |
embryonic stem cell | 3.73e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.15e-07 | 101 |