FFCP PHASE1:Hg19::chr1:163042618..163042628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:163042618..163042628,+ | |||
|description=CAGE_peak_at_chr1:163042618..163042628,+ | |description=CAGE_peak_at_chr1:163042618..163042628,+ | ||
|id=chr1:163042618..163042628,+ | |id=chr1:163042618..163042628,+ | ||
|ontology_enrichment_celltype=CL:0000359!2.23e-12!32;CL:0000192!2.70e-09!42;CL:0000514!2.70e-09!42;CL:0000680!5.66e-08!57;CL:0000056!5.66e-08!57;CL:0000355!5.66e-08!57;CL:0000187!5.77e-07!54 | |ontology_enrichment_celltype=CL:0000359!2.23e-12!32;CL:0000192!2.70e-09!42;CL:0000514!2.70e-09!42;CL:0000680!5.66e-08!57;CL:0000056!5.66e-08!57;CL:0000355!5.66e-08!57;CL:0000187!5.77e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002579;2.38e-12;3!CL:1000306;1.73e-09;4!CL:0002547;1.73e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.37e-12,3;CL:1000306,1.73e-09,4;CL:0002547,1.73e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.60e-08;10 | |||
|ontology_enrichment_disease=DOID:2394!2.44e-13!14;DOID:120!8.14e-07!27;DOID:0060084!8.15e-07!3;DOID:127!8.15e-07!3 | |ontology_enrichment_disease=DOID:2394!2.44e-13!14;DOID:120!8.14e-07!27;DOID:0060084!8.15e-07!3;DOID:127!8.15e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.24e-27;3!DOID:127;4.24e-27;3!DOID:0060072;1.71e-20;4!DOID:2394;4.17e-10;14!DOID:120;7.36e-08;27!DOID:193;2.64e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.98e-27,3;DOID:127,2.98e-27,3;DOID:0060072,1.32e-20,4;DOID:2394,4.32e-10,14;DOID:120,8.24e-08,27;DOID:193,2.93e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002619!4.71e-16!22;UBERON:0001950!5.13e-16!20;UBERON:0002020!2.82e-14!34;UBERON:0003528!2.82e-14!34;UBERON:0001869!5.32e-14!32;UBERON:0000956!1.22e-13!25;UBERON:0000203!1.22e-13!25;UBERON:0002616!1.54e-13!59;UBERON:0002791!2.02e-13!33;UBERON:0001637!4.93e-13!42;UBERON:0003509!4.93e-13!42;UBERON:0004572!4.93e-13!42;UBERON:0001893!7.06e-13!34;UBERON:0002780!2.06e-12!41;UBERON:0001890!2.06e-12!41;UBERON:0006240!2.06e-12!41;UBERON:0000025!2.39e-12!194;UBERON:0003080!5.54e-12!42;UBERON:0001049!6.28e-12!57;UBERON:0005068!6.28e-12!57;UBERON:0006241!6.28e-12!57;UBERON:0007135!6.28e-12!57;UBERON:0003075!9.48e-12!86;UBERON:0007284!9.48e-12!86;UBERON:0000955!2.69e-11!69;UBERON:0006238!2.69e-11!69;UBERON:0002346!7.87e-11!90;UBERON:0002049!1.25e-10!79;UBERON:0007798!1.25e-10!79;UBERON:0005743!3.99e-10!86;UBERON:0001017!4.00e-10!82;UBERON:0003056!6.41e-10!61;UBERON:0001981!7.09e-10!60;UBERON:0007500!7.09e-10!60;UBERON:0004537!7.09e-10!60;UBERON:0006965!7.09e-10!60;UBERON:0004872!1.29e-09!84;UBERON:0004535!2.44e-09!110;UBERON:0000073!3.21e-09!94;UBERON:0001016!3.21e-09!94;UBERON:0000119!3.95e-09!312;UBERON:0002118!4.34e-09!5;UBERON:0004532!4.34e-09!5;UBERON:0000483!6.79e-09!309;UBERON:0001009!7.61e-09!113;UBERON:0000055!1.45e-08!69;UBERON:0004573!1.62e-08!33;UBERON:0004571!1.62e-08!33;UBERON:0004111!4.37e-08!241;UBERON:0000477!5.44e-08!286;UBERON:0001134!4.33e-07!61;UBERON:0002036!4.33e-07!61;UBERON:0003082!4.33e-07!61;UBERON:0001871!9.40e-07!7;UBERON:0000033!9.56e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.73e-09;4!UBERON:0000415;1.73e-09;4!UBERON:0007240;1.73e-09;4!UBERON:0005742;1.73e-09;4!UBERON:0005734;1.73e-09;4!UBERON:0004664;1.73e-09;4!UBERON:0004663;1.73e-09;4!UBERON:0003134;1.34e-08;33!UBERON:0000995;1.86e-08;17!UBERON:0003975;5.39e-08;18!UBERON:0001637;7.58e-08;42!UBERON:0003509;7.58e-08;42!UBERON:0004572;7.58e-08;42!UBERON:0002118;9.22e-08;5!UBERON:0001950;6.00e-07;20!UBERON:0004175;7.19e-07;21!UBERON:0000474;8.24e-07;37!UBERON:0000200;8.51e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.73e-09,4;UBERON:0007240,1.73e-09,4;UBERON:0005742,1.73e-09,4;UBERON:0005734,1.73e-09,4;UBERON:0004664,1.73e-09,4;UBERON:0004663,1.73e-09,4;UBERON:0001637,1.93e-09,42;UBERON:0003509,1.93e-09,42;UBERON:0004572,1.93e-09,42;UBERON:0003134,5.40e-08,37;UBERON:0000474,5.40e-08,37;UBERON:0002118,9.23e-08,5;UBERON:0003100,3.62e-07,41;UBERON:0001950,5.68e-07,20;UBERON:0000995,7.43e-07,21;UBERON:0000200,7.47e-07,6 | |||
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| ||
|short_description=p@chr1:163042618..163042628,+ | |short_description=p@chr1:163042618..163042628,+ | ||
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Latest revision as of 23:46, 27 July 2015
Short description: | p@chr1:163042618..163042628, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:163042618..163042628, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.37e-12 | 3 |
fibroblast of tunica adventitia of artery | 1.73e-09 | 4 |
fibroblast of the aortic adventitia | 1.73e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.73e-09 | 4 |
tunica adventitia of artery | 1.73e-09 | 4 |
adventitia | 1.73e-09 | 4 |
tunica adventitia of blood vessel | 1.73e-09 | 4 |
aorta tunica adventitia | 1.73e-09 | 4 |
aorta wall | 1.73e-09 | 4 |
artery | 1.93e-09 | 42 |
arterial blood vessel | 1.93e-09 | 42 |
arterial system | 1.93e-09 | 42 |
female reproductive organ | 5.40e-08 | 37 |
female reproductive system | 5.40e-08 | 37 |
right ovary | 9.23e-08 | 5 |
female organism | 3.62e-07 | 41 |
neocortex | 5.68e-07 | 20 |
uterus | 7.43e-07 | 21 |
gyrus | 7.47e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.98e-27 | 3 |
leiomyoma | 2.98e-27 | 3 |
benign neoplasm | 1.32e-20 | 4 |
ovarian cancer | 4.32e-10 | 14 |
female reproductive organ cancer | 8.24e-08 | 27 |
reproductive organ cancer | 2.93e-07 | 29 |