FFCP PHASE1:Hg19::chr1:174843741..174843744,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:174843741..174843744,+ | |||
|description=CAGE_peak_at_chr1:174843741..174843744,+ | |description=CAGE_peak_at_chr1:174843741..174843744,+ | ||
|id=chr1:174843741..174843744,+ | |id=chr1:174843741..174843744,+ | ||
|ontology_enrichment_celltype=CL:0002087!3.08e-12!119;CL:0000738!4.78e-12!140;CL:0002031!3.92e-11!124;CL:0000037!1.29e-09!172;CL:0000566!1.29e-09!172;CL:0000988!2.14e-09!182;CL:0002032!1.57e-08!165;CL:0000837!1.57e-08!165;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53;CL:0000838!6.71e-08!52 | |ontology_enrichment_celltype=CL:0002087!3.08e-12!119;CL:0000738!4.78e-12!140;CL:0002031!3.92e-11!124;CL:0000037!1.29e-09!172;CL:0000566!1.29e-09!172;CL:0000988!2.14e-09!182;CL:0002032!1.57e-08!165;CL:0000837!1.57e-08!165;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53;CL:0000838!6.71e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0002553;9.07e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.85e-08,115;CL:0002553,5.70e-08,1;CL:0000047,6.05e-08,8;CL:0002031,8.08e-08,120;CL:0000473,1.12e-07,48;CL:0000234,1.12e-07,48;CL:0000860,6.22e-07,42;CL:0002057,6.22e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.56e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.27e-13!82;UBERON:0005743!1.84e-12!86;UBERON:0001049!3.24e-12!57;UBERON:0005068!3.24e-12!57;UBERON:0006241!3.24e-12!57;UBERON:0007135!3.24e-12!57;UBERON:0002780!4.15e-12!41;UBERON:0001890!4.15e-12!41;UBERON:0006240!4.15e-12!41;UBERON:0001893!1.05e-11!34;UBERON:0003080!1.43e-11!42;UBERON:0007023!1.97e-11!115;UBERON:0002616!2.21e-11!59;UBERON:0000073!3.50e-11!94;UBERON:0001016!3.50e-11!94;UBERON:0002791!3.91e-11!33;UBERON:0000955!4.29e-11!69;UBERON:0006238!4.29e-11!69;UBERON:0001869!5.79e-11!32;UBERON:0002020!1.25e-10!34;UBERON:0003528!1.25e-10!34;UBERON:0002619!3.26e-09!22;UBERON:0000956!3.57e-08!25;UBERON:0000203!3.57e-08!25;UBERON:0001950!7.94e-08!20;UBERON:0003056!3.88e-07!61;UBERON:0002346!4.80e-07!90;UBERON:0003075!5.94e-07!86;UBERON:0007284!5.94e-07!86 | |ontology_enrichment_uberon=UBERON:0001017!4.27e-13!82;UBERON:0005743!1.84e-12!86;UBERON:0001049!3.24e-12!57;UBERON:0005068!3.24e-12!57;UBERON:0006241!3.24e-12!57;UBERON:0007135!3.24e-12!57;UBERON:0002780!4.15e-12!41;UBERON:0001890!4.15e-12!41;UBERON:0006240!4.15e-12!41;UBERON:0001893!1.05e-11!34;UBERON:0003080!1.43e-11!42;UBERON:0007023!1.97e-11!115;UBERON:0002616!2.21e-11!59;UBERON:0000073!3.50e-11!94;UBERON:0001016!3.50e-11!94;UBERON:0002791!3.91e-11!33;UBERON:0000955!4.29e-11!69;UBERON:0006238!4.29e-11!69;UBERON:0001869!5.79e-11!32;UBERON:0002020!1.25e-10!34;UBERON:0003528!1.25e-10!34;UBERON:0002619!3.26e-09!22;UBERON:0000956!3.57e-08!25;UBERON:0000203!3.57e-08!25;UBERON:0001950!7.94e-08!20;UBERON:0003056!3.88e-07!61;UBERON:0002346!4.80e-07!90;UBERON:0003075!5.94e-07!86;UBERON:0007284!5.94e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001871;7.91e-09;6!UBERON:0001301;9.07e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,1.22e-08,6;UBERON:0001301,1.75e-07,1;UBERON:0001017,2.06e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0.309868802321207,1.42169232487422,0.293600439334847,0,1.00272223735071,0.868043482863407,0.447830948479849,0,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,3.97909060082173,1.28371610830437,0,0,0,0,2.03146467040009,0.56738522469114,0,0.502497330513487,0.521482918420201,0,5.44859552370032,0.736555271975129,4.1140110367315,0,0.212604299965044,0.419317291016752,0.673971786878971,0.450530678524519,0.16072558669708,0.285012743741249,0.39783335439818,2.00930569141097,0,0.546138611262131,0,0.853460445133014,0,0,0.661044872784862,0,1.1384259382189,1.17447437874188,0.764546456250458,0,0,0.263384084775077,0.590129310341499,1.96505381374582,0.822405995998037,0,0,0,0,0.334231370655521,0.883817722424512,0.221533894583621,0,0.512365278902701,0.260118695119756,0.164437904603676,0.829050053357545,0,0.14828656316206,0,0,0.339928028092699,0.766440987203842,0.68725489096526,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0.80642697289893,0.802320587350522,1.59306844271079,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0.953962497221368,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,1.72288698817931,0.464775771478074,0.310983165046111,0.252320850875628,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0.179060963239896,0,0,0.646882724578552,1.28343036279748,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.435050081742686,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0.185803175125719,0.28853842595289,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.334330152832435,0,0,0.593929361665277,0.307160702099232,0,1.1253553312841,0.111308705022906,0,0.422250816255987,0.796991953004279,0.552567831062295,0.755798243562828,0,0.246169610922139,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0,0,1.99613798001194,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0,1.03423011972439,0,0,0,0.844175070377856,1.52581736317083,1.76926815889959,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.988511511572023,0.730953646538188,0.202203398942031,0,0.468528891450678,0.182454789215666,0,0,0.789168805698781,1.20990716048664,1.22429104652196,0.442306057399416,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0.195984794828755,0,1.04836000945218,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0.443175571691151,0.977756913674015,0,0.426905989478705,0,0,0,0.857974989309823,0,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0.410716136675979,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.817220436669454,1.92903778158023,1.51293380256957,0.83088067605837,0,0.77380195455795,0.242998226632099,0,0.394028536495991,0.209818352539992,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0,0,0,0,0.26446520348538,0,0,0.320362237703084,0.157204305099666,0,0.496166021811951,0.197611631897944,0.852548188666271,0,0,0,0,0.327872630709804,0.314108192500469,0,0.122026264901963,0.751145584238999,0,0.221858103073705,0.248385611765534,1.10678907948985,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0.490696182767533,0,0.245772908753719,0,0.19998739585493,0.213383459388282,0.344429959321631,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0.371807292777007,0,0,0.157723490002507,1.60114149657094,0,0,0.321146125482298,0,0.957803154342908,0.41023272848151,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| ||
|short_description=p@chr1:174843741..174843744,+ | |short_description=p@chr1:174843741..174843744,+ | ||
}} | }} |
Latest revision as of 00:38, 28 July 2015
Short description: | p@chr1:174843741..174843744, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:174843741..174843744, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.85e-08 | 115 |
lung fibroblast | 5.70e-08 | 1 |
neuronal stem cell | 6.05e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 8.08e-08 | 120 |
defensive cell | 1.12e-07 | 48 |
phagocyte | 1.12e-07 | 48 |
classical monocyte | 6.22e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.22e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 1.22e-08 | 6 |
epididymis | 1.75e-07 | 1 |
central nervous system | 2.06e-07 | 81 |