FFCP PHASE1:Hg19::chr1:178636283..178636287,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:178636283..178636287,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr1:178636283..178636287,+ | |description=CAGE_peak_at_chr1:178636283..178636287,+ | ||
|id=chr1:178636283..178636287,+ | |id=chr1:178636283..178636287,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.13e-68!24;CL:0000826!4.13e-68!24;CL:0000236!9.32e-45!14;CL:0000838!3.18e-29!52;CL:0000542!1.35e-28!53;CL:0000051!1.35e-28!53;CL:0000738!3.19e-13!140;CL:0000037!3.32e-12!172;CL:0000566!3.32e-12!172;CL:0002087!1.01e-11!119;CL:0000988!2.98e-11!182;CL:0002032!1.76e-10!165;CL:0000837!1.76e-10!165;CL:0002031!8.34e-10!124;CL:0000767!9.40e-08!3;CL:0000819!5.90e-07!1 | |ontology_enrichment_celltype=CL:0000945!4.13e-68!24;CL:0000826!4.13e-68!24;CL:0000236!9.32e-45!14;CL:0000838!3.18e-29!52;CL:0000542!1.35e-28!53;CL:0000051!1.35e-28!53;CL:0000738!3.19e-13!140;CL:0000037!3.32e-12!172;CL:0000566!3.32e-12!172;CL:0002087!1.01e-11!119;CL:0000988!2.98e-11!182;CL:0002032!1.76e-10!165;CL:0000837!1.76e-10!165;CL:0002031!8.34e-10!124;CL:0000767!9.40e-08!3;CL:0000819!5.90e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.38e-78;24!CL:0000236;1.60e-64;13!CL:0000542;2.16e-23;53!CL:0000785;5.42e-15;1!CL:0000819;5.42e-15;1!CL:0002087;8.09e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.99e-78,24;CL:0000826,5.99e-78,24;CL:0000236,6.51e-60,14;CL:0000838,2.19e-35,52;CL:0000542,1.07e-34,53;CL:0000051,1.07e-34,53;CL:0002087,3.75e-15,115;CL:0000819,5.42e-15,1;CL:0002031,1.81e-14,120;CL:0000738,1.29e-12,136;CL:0002032,1.91e-10,161;CL:0000837,1.91e-10,161;CL:0000037,5.94e-10,168;CL:0000988,2.25e-09,177;CL:0000785,3.82e-08,2;CL:0000955,3.82e-08,2;CL:0000818,3.82e-08,2;CL:0000954,3.82e-08,2;CL:0000816,3.82e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.16e-23;53!CL:0000954;3.82e-08;2!UBERON:0006965;7.03e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.34e-08!10;DOID:0060073!5.90e-07!1;DOID:8675!5.90e-07!1 | |ontology_enrichment_disease=DOID:0060058!1.34e-08!10;DOID:0060073!5.90e-07!1;DOID:8675!5.90e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060073;5.42e-15;1!DOID:8675;5.42e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.42e-15,1;DOID:8675,5.42e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0000029!9.15e-07!1 | |ontology_enrichment_uberon=UBERON:0000029!9.15e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.84e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.61e-14,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.14940825229924,1.65292640758726,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,24.0266002903742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0.853460445133014,2.80277190925209,0.574752439954483,1.32208974556972,0.954053754535364,3.98449078376614,3.52342313622563,2.6759125968766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0700268137233,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51149313853035,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.14940825229924,1.65292640758726,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,24.0266002903742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0.853460445133014,2.80277190925209,0.574752439954483,1.32208974556972,0.954053754535364,3.98449078376614,3.52342313622563,2.6759125968766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0700268137233,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51149313853035,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | ||
|short_description=p@chr1:178636283..178636287,+ | |short_description=p@chr1:178636283..178636287,+ | ||
}} | }} |
Latest revision as of 00:48, 28 July 2015
Short description: | p@chr1:178636283..178636287, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:178636283..178636287, + |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.99e-78 | 24 |
pro-B cell | 5.99e-78 | 24 |
B cell | 6.51e-60 | 14 |
lymphoid lineage restricted progenitor cell | 2.19e-35 | 52 |
lymphocyte | 1.07e-34 | 53 |
common lymphoid progenitor | 1.07e-34 | 53 |
nongranular leukocyte | 3.75e-15 | 115 |
B-1 B cell | 5.42e-15 | 1 |
hematopoietic lineage restricted progenitor cell | 1.81e-14 | 120 |
leukocyte | 1.29e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.91e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-10 | 161 |
hematopoietic stem cell | 5.94e-10 | 168 |
hematopoietic cell | 2.25e-09 | 177 |
mature B cell | 3.82e-08 | 2 |
pre-B-II cell | 3.82e-08 | 2 |
transitional stage B cell | 3.82e-08 | 2 |
small pre-B-II cell | 3.82e-08 | 2 |
immature B cell | 3.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.61e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.42e-15 | 1 |
lymphosarcoma | 5.42e-15 | 1 |