FFCP PHASE1:Hg19::chr1:188791401..188791408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:188791401..188791408,- | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_at_chr1:188791401..188791408,- | |description=CAGE_peak_at_chr1:188791401..188791408,- | ||
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|ontology_enrichment_celltype=CL:0002593!3.99e-14!2;CL:0002150!6.30e-09!3;CL:0000861!6.30e-09!3;CL:0000680!1.40e-07!57;CL:0000056!1.40e-07!57;CL:0000355!1.40e-07!57;CL:0000319!1.69e-07!1;CL:0000946!2.63e-07!1;CL:0000786!2.63e-07!1;CL:0000980!2.63e-07!1;CL:0000515!6.08e-07!4 | |ontology_enrichment_celltype=CL:0002593!3.99e-14!2;CL:0002150!6.30e-09!3;CL:0000861!6.30e-09!3;CL:0000680!1.40e-07!57;CL:0000056!1.40e-07!57;CL:0000355!1.40e-07!57;CL:0000319!1.69e-07!1;CL:0000946!2.63e-07!1;CL:0000786!2.63e-07!1;CL:0000980!2.63e-07!1;CL:0000515!6.08e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002593;1.07e-17;2!CL:0002595;7.01e-08;5!CL:0002149;8.97e-07;6!CL:0002255;8.97e-07;6 | |ontology_enrichment_celltype_v019=CL:0002593;1.07e-17;2!CL:0002595;7.01e-08;5!CL:0002149;8.97e-07;6!CL:0002255;8.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.27e-17,2;CL:0002595,7.49e-08,5;CL:0002149,8.48e-07,6;CL:0002255,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:169!3.60e-10!6;DOID:3030!1.69e-07!1 | |ontology_enrichment_disease=DOID:169!3.60e-10!6;DOID:3030!1.69e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4556;2.31e-12;3!DOID:3908;6.13e-08;5!DOID:1115;1.33e-07;20!DOID:3001;8.97e-07;6 | |ontology_enrichment_disease_v019=DOID:4556;2.31e-12;3!DOID:3908;6.13e-08;5!DOID:1115;1.33e-07;20!DOID:3001;8.97e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,2.31e-12,3;DOID:3908,6.13e-08,5;DOID:1115,1.29e-07,20;DOID:3001,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002456!3.99e-14!2;UBERON:0000013!4.17e-12!5;UBERON:0002410!4.17e-12!5;UBERON:0000010!2.29e-11!8;UBERON:0000998!1.01e-07!1;UBERON:0006868!1.01e-07!1;UBERON:0001134!5.46e-07!61;UBERON:0002036!5.46e-07!61;UBERON:0003082!5.46e-07!61 | |ontology_enrichment_uberon=UBERON:0002456!3.99e-14!2;UBERON:0000013!4.17e-12!5;UBERON:0002410!4.17e-12!5;UBERON:0000010!2.29e-11!8;UBERON:0000998!1.01e-07!1;UBERON:0006868!1.01e-07!1;UBERON:0001134!5.46e-07!61;UBERON:0002036!5.46e-07!61;UBERON:0003082!5.46e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.07e-17;2!UBERON:0003834;7.01e-08;5!UBERON:0001533;7.01e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002456;1.07e-17;2!UBERON:0003834;7.01e-08;5!UBERON:0001533;7.01e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.27e-17,2;UBERON:0003834,7.49e-08,5;UBERON:0001533,7.49e-08,5 | |||
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|short_description=p@chr1:188791401..188791408,- | |short_description=p@chr1:188791401..188791408,- | ||
}} | }} |
Latest revision as of 01:35, 28 July 2015
Short description: | p@chr1:188791401..188791408, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:188791401..188791408, - |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.27e-17 | 2 |
smooth muscle cell of the subclavian artery | 7.49e-08 | 5 |
epithelial cell of uterus | 8.48e-07 | 6 |
stromal cell of endometrium | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.27e-17 | 2 |
thoracic segment blood vessel | 7.49e-08 | 5 |
subclavian artery | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 2.31e-12 | 3 |
non-small cell lung carcinoma | 6.13e-08 | 5 |
sarcoma | 1.29e-07 | 20 |
female reproductive endometrioid cancer | 8.48e-07 | 6 |