FFCP PHASE1:Hg19::chr1:200270929..200270934,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:200270929..200270934,- | |||
|coexpression_cluster_id=C513 | |coexpression_cluster_id=C513 | ||
|description=CAGE_peak_at_chr1:200270929..200270934,- | |description=CAGE_peak_at_chr1:200270929..200270934,- | ||
Latest revision as of 02:00, 28 July 2015
| Short description: | p@chr1:200270929..200270934, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:200270929..200270934, - |
| Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr1:200270929..200270934- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of tracheobronchial tree | 6.50e-13 | 9 |
| epithelial cell of lower respiratory tract | 6.50e-13 | 9 |
| respiratory epithelial cell | 1.12e-11 | 13 |
| duct epithelial cell | 7.04e-11 | 3 |
| branched duct epithelial cell | 7.04e-11 | 3 |
| tracheal epithelial cell | 7.04e-11 | 3 |
| tracheoblast | 7.04e-11 | 3 |
| endodermal cell | 2.08e-10 | 58 |
| epithelial cell | 2.34e-10 | 253 |
| endo-epithelial cell | 3.03e-10 | 42 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| tracheobronchial tree | 7.87e-10 | 15 |
| lower respiratory tract | 7.87e-10 | 15 |
| mucosa of oral region | 5.23e-08 | 4 |
| respiratory system mucosa | 5.23e-08 | 4 |
| trachea | 1.09e-07 | 7 |
| respiratory airway | 1.09e-07 | 7 |
| mucosa | 4.20e-07 | 20 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 4.09e-14 | 14 |
| cell type cancer | 1.60e-12 | 143 |
| carcinoma | 1.85e-11 | 106 |
| pancreatic cancer | 1.53e-07 | 4 |
| disease of cellular proliferation | 1.59e-07 | 239 |
| pancreas adenocarcinoma | 1.78e-07 | 2 |
| pancreatic carcinoma | 1.78e-07 | 2 |
| pancreatic ductal adenocarcinoma | 1.78e-07 | 2 |
| tubular adenocarcinoma | 2.78e-07 | 2 |
Showing 1 to 9 of 9 entries
