FFCP PHASE1:Hg19::chr1:203294429..203294440,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:203294429..203294440,+ | |||
|coexpression_cluster_id=C1692 | |||
|description=CAGE_peak_at_chr1:203294429..203294440,+ | |description=CAGE_peak_at_chr1:203294429..203294440,+ | ||
|id=chr1:203294429..203294440,+ | |id=chr1:203294429..203294440,+ | ||
|ontology_enrichment_celltype=CL:0002087!6.49e-55!119;CL:0000945!2.99e-48!24;CL:0000826!2.99e-48!24;CL:0002031!5.91e-48!124;CL:0000738!2.45e-46!140;CL:0000037!1.42e-36!172;CL:0000566!1.42e-36!172;CL:0000838!2.94e-35!52;CL:0000542!1.97e-34!53;CL:0000051!1.97e-34!53;CL:0002032!5.41e-34!165;CL:0000837!5.41e-34!165;CL:0000988!9.42e-34!182;CL:0000236!4.19e-32!14;CL:0002057!9.69e-32!42;CL:0000860!3.84e-29!45;CL:0002194!2.12e-18!63;CL:0000576!2.12e-18!63;CL:0000040!2.12e-18!63;CL:0000559!2.12e-18!63;CL:0002009!1.23e-17!65;CL:0000839!6.46e-16!70;CL:0000557!1.33e-15!71;CL:0000766!3.72e-14!76;CL:0000134!8.87e-11!358;CL:0002320!2.65e-10!365;CL:0000623!1.12e-08!3;CL:0000825!1.12e-08!3;CL:0000219!1.22e-08!390;CL:0000763!1.96e-08!112;CL:0000049!1.96e-08!112;CL:0000048!3.71e-07!430;CL:0000034!5.00e-07!444;CL:0000723!7.13e-07!436;CL:0002393!8.68e-07!9;CL:0002397!8.68e-07!9 | |ontology_enrichment_celltype=CL:0002087!6.49e-55!119;CL:0000945!2.99e-48!24;CL:0000826!2.99e-48!24;CL:0002031!5.91e-48!124;CL:0000738!2.45e-46!140;CL:0000037!1.42e-36!172;CL:0000566!1.42e-36!172;CL:0000838!2.94e-35!52;CL:0000542!1.97e-34!53;CL:0000051!1.97e-34!53;CL:0002032!5.41e-34!165;CL:0000837!5.41e-34!165;CL:0000988!9.42e-34!182;CL:0000236!4.19e-32!14;CL:0002057!9.69e-32!42;CL:0000860!3.84e-29!45;CL:0002194!2.12e-18!63;CL:0000576!2.12e-18!63;CL:0000040!2.12e-18!63;CL:0000559!2.12e-18!63;CL:0002009!1.23e-17!65;CL:0000839!6.46e-16!70;CL:0000557!1.33e-15!71;CL:0000766!3.72e-14!76;CL:0000134!8.87e-11!358;CL:0002320!2.65e-10!365;CL:0000623!1.12e-08!3;CL:0000825!1.12e-08!3;CL:0000219!1.22e-08!390;CL:0000763!1.96e-08!112;CL:0000049!1.96e-08!112;CL:0000048!3.71e-07!430;CL:0000034!5.00e-07!444;CL:0000723!7.13e-07!436;CL:0002393!8.68e-07!9;CL:0002397!8.68e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.70e-128;13!CL:0000945;9.27e-69;24!CL:0000542;1.19e-28;53!CL:0000785;6.42e-13;1!CL:0000819;6.42e-13;1!CL:0002087;2.16e-09;104!CL:0000738;1.15e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.46e-119,14;CL:0000945,6.71e-69,24;CL:0000826,6.71e-69,24;CL:0000838,1.53e-36,52;CL:0000542,7.99e-36,53;CL:0000051,7.99e-36,53;CL:0002087,6.49e-24,115;CL:0002031,7.54e-23,120;CL:0000738,5.84e-20,136;CL:0002032,1.40e-16,161;CL:0000837,1.40e-16,161;CL:0000037,8.20e-16,168;CL:0000988,6.51e-15,177;CL:0000819,8.64e-13,1;CL:0000785,4.98e-07,2;CL:0000955,4.98e-07,2;CL:0000818,4.98e-07,2;CL:0000954,4.98e-07,2;CL:0000816,4.98e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.19e-28;53!CL:0000954;4.29e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.72e-08!10 | |ontology_enrichment_disease=DOID:0060058!3.72e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060073;6.42e-13;1!DOID:8675;6.42e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,8.64e-13,1;DOID:8675,8.64e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.26e-19!112;UBERON:0002390!1.67e-19!102;UBERON:0003061!1.67e-19!102;UBERON:0002405!2.01e-16!115;UBERON:0002371!1.98e-14!80;UBERON:0001474!5.80e-13!86;UBERON:0004765!4.39e-10!101;UBERON:0001434!4.39e-10!101;UBERON:0002384!1.17e-09!375;UBERON:0004177!5.12e-09!7;UBERON:0002106!8.01e-08!3;UBERON:0004854!8.01e-08!3;UBERON:0009034!8.01e-08!3;UBERON:0002095!8.01e-08!3;UBERON:0004782!8.01e-08!3;UBERON:0003281!8.01e-08!3;UBERON:0009664!8.01e-08!3;UBERON:0002296!8.01e-08!3;UBERON:0005602!8.01e-08!3;UBERON:0001179!8.01e-08!3;UBERON:0006293!8.01e-08!3 | |ontology_enrichment_uberon=UBERON:0002193!1.26e-19!112;UBERON:0002390!1.67e-19!102;UBERON:0003061!1.67e-19!102;UBERON:0002405!2.01e-16!115;UBERON:0002371!1.98e-14!80;UBERON:0001474!5.80e-13!86;UBERON:0004765!4.39e-10!101;UBERON:0001434!4.39e-10!101;UBERON:0002384!1.17e-09!375;UBERON:0004177!5.12e-09!7;UBERON:0002106!8.01e-08!3;UBERON:0004854!8.01e-08!3;UBERON:0009034!8.01e-08!3;UBERON:0002095!8.01e-08!3;UBERON:0004782!8.01e-08!3;UBERON:0003281!8.01e-08!3;UBERON:0009664!8.01e-08!3;UBERON:0002296!8.01e-08!3;UBERON:0005602!8.01e-08!3;UBERON:0001179!8.01e-08!3;UBERON:0006293!8.01e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.29e-07;2!UBERON:0005058;4.29e-07;2!UBERON:0009113;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr1:203294429..203294440,+ | |short_description=p@chr1:203294429..203294440,+ | ||
}} | }} |
Latest revision as of 02:28, 28 July 2015
Short description: | p@chr1:203294429..203294440, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203294429..203294440, + |
Coexpression cluster: | C1692_CD19_diffuse_Hodgkin_Neutrophils_Dendritic_colon_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.46e-119 | 14 |
lymphocyte of B lineage | 6.71e-69 | 24 |
pro-B cell | 6.71e-69 | 24 |
lymphoid lineage restricted progenitor cell | 1.53e-36 | 52 |
lymphocyte | 7.99e-36 | 53 |
common lymphoid progenitor | 7.99e-36 | 53 |
nongranular leukocyte | 6.49e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 7.54e-23 | 120 |
leukocyte | 5.84e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.40e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-16 | 161 |
hematopoietic stem cell | 8.20e-16 | 168 |
hematopoietic cell | 6.51e-15 | 177 |
B-1 B cell | 8.64e-13 | 1 |
mature B cell | 4.98e-07 | 2 |
pre-B-II cell | 4.98e-07 | 2 |
transitional stage B cell | 4.98e-07 | 2 |
small pre-B-II cell | 4.98e-07 | 2 |
immature B cell | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 8.64e-13 | 1 |
lymphosarcoma | 8.64e-13 | 1 |