FFCP PHASE1:Hg19::chr1:210789950..210789954,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:210789950..210789954,+ | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr1:210789950..210789954,+ | |||
|id=chr1:210789950..210789954,+ | |||
|ontology_enrichment_celltype=CL:0000242!4.02e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.21e-21;5!CL:0002321;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10!DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10;DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001950!6.18e-35!20;UBERON:0001893!3.76e-34!34;UBERON:0002619!7.07e-32!22;UBERON:0001869!9.63e-29!32;UBERON:0002780!2.33e-28!41;UBERON:0001890!2.33e-28!41;UBERON:0006240!2.33e-28!41;UBERON:0000956!3.61e-28!25;UBERON:0000203!3.61e-28!25;UBERON:0002791!7.22e-28!33;UBERON:0003080!1.10e-27!42;UBERON:0002020!7.59e-21!34;UBERON:0003528!7.59e-21!34;UBERON:0000955!1.87e-20!69;UBERON:0006238!1.87e-20!69;UBERON:0001049!2.36e-20!57;UBERON:0005068!2.36e-20!57;UBERON:0006241!2.36e-20!57;UBERON:0007135!2.36e-20!57;UBERON:0002616!1.19e-19!59;UBERON:0003056!5.38e-19!61;UBERON:0000073!5.54e-18!94;UBERON:0001016!5.54e-18!94;UBERON:0001017!3.70e-17!82;UBERON:0002022!1.04e-16!1;UBERON:0002902!1.41e-16!1;UBERON:0009899!1.41e-16!1;UBERON:0002581!1.65e-16!1;UBERON:0005743!2.45e-16!86;UBERON:0007190!2.63e-16!1;UBERON:0002336!3.07e-16!1;UBERON:0001018!3.07e-16!1;UBERON:0002473!3.07e-16!1;UBERON:0005340!3.07e-16!1;UBERON:0002316!3.07e-16!1;UBERON:0003544!3.07e-16!1;UBERON:0001020!3.07e-16!1;UBERON:0005970!3.07e-16!1;UBERON:0002437!3.07e-16!1;UBERON:0003075!2.54e-13!86;UBERON:0007284!2.54e-13!86;UBERON:0001872!4.39e-13!5;UBERON:0002346!1.06e-12!90;UBERON:0004121!1.07e-11!169;UBERON:0000924!2.10e-11!173;UBERON:0006601!2.10e-11!173;UBERON:0000033!3.15e-11!123;UBERON:0000200!5.09e-11!6;UBERON:0000153!1.14e-10!129;UBERON:0007811!1.14e-10!129;UBERON:0007023!7.04e-10!115;UBERON:0001870!4.70e-09!2;UBERON:0001876!5.49e-09!2;UBERON:0005162!8.74e-09!2;UBERON:0000122!8.74e-09!2;UBERON:0001871!1.53e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0000010;2.19e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
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|short_description=p@chr1:210789950..210789954,+ | |||
}} | }} |
Latest revision as of 03:31, 28 July 2015
Short description: | p@chr1:210789950..210789954, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:210789950..210789954, + |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |
gastrointestinal system cancer | 2.00e-08 | 14 |