FFCP PHASE1:Hg19::chr1:215157270..215157279,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:215157270..215157279,+ | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr1:215157270..215157279,+ | |description=CAGE_peak_at_chr1:215157270..215157279,+ | ||
|id=chr1:215157270..215157279,+ | |id=chr1:215157270..215157279,+ | ||
|ontology_enrichment_celltype=CL:0002583;6.30e-21;2!CL:0002570;1.04e-20;8!CL:1000306;2.53e-11;4!CL:0002547;2.53e-11;4 | |ontology_enrichment_celltype=CL:1000306!1.51e-29!4;CL:0002547!1.51e-29!4;CL:0002583!5.99e-16!2;CL:0002334!7.16e-15!12;CL:0002582!1.87e-10!3;CL:0002570!5.89e-09!8;CL:0000569!4.71e-08!4;CL:0000011!4.71e-08!4;CL:0002595!8.90e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002583;6.30e-21;2!CL:0002570;1.04e-20;8!CL:1000306;2.53e-11;4!CL:0002547;2.53e-11;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002583,6.96e-21,2;CL:0002570,9.92e-21,8;CL:1000306,2.53e-11,4;CL:0002547,2.53e-11,4 | ||
|ontology_enrichment_uberon=UBERON:0001013;2.59e-12;14!UBERON:0004797;2.53e-11;4!UBERON:0000415;2.53e-11;4!UBERON:0007240;2.53e-11;4!UBERON:0005742;2.53e-11;4!UBERON:0005734;2.53e-11;4!UBERON:0004664;2.53e-11;4!UBERON:0004663;2.53e-11;4!UBERON:0002119;2.80e-11;4!UBERON:0002072;3.35e-09;5 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!8.63e-18!14;DOID:120!5.43e-09!27;DOID:193!2.46e-08!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!1.51e-29!4;UBERON:0007240!1.51e-29!4;UBERON:0005742!1.51e-29!4;UBERON:0005734!1.51e-29!4;UBERON:0004664!1.51e-29!4;UBERON:0004663!1.51e-29!4;UBERON:0004573!4.93e-10!33;UBERON:0004571!4.93e-10!33;UBERON:0000060!5.57e-10!12;UBERON:0000947!1.57e-08!21;UBERON:0010191!1.57e-08!21;UBERON:0002119!3.54e-08!4;UBERON:0004531!3.54e-08!4;UBERON:0001637!1.05e-07!42;UBERON:0003509!1.05e-07!42;UBERON:0004572!1.05e-07!42;UBERON:0002072!6.87e-07!5;UBERON:0003834!8.90e-07!5;UBERON:0001533!8.90e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.59e-12;14!UBERON:0004797;2.53e-11;4!UBERON:0000415;2.53e-11;4!UBERON:0007240;2.53e-11;4!UBERON:0005742;2.53e-11;4!UBERON:0005734;2.53e-11;4!UBERON:0004664;2.53e-11;4!UBERON:0004663;2.53e-11;4!UBERON:0002119;2.80e-11;4!UBERON:0002072;3.35e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.51e-12,14;UBERON:0000415,2.53e-11,4;UBERON:0007240,2.53e-11,4;UBERON:0005742,2.53e-11,4;UBERON:0005734,2.53e-11,4;UBERON:0004664,2.53e-11,4;UBERON:0004663,2.53e-11,4;UBERON:0002119,2.80e-11,4;UBERON:0002072,3.49e-09,5;UBERON:0004797,5.08e-07,7 | |||
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|short_description=p@chr1:215157270..215157279,+ | |short_description=p@chr1:215157270..215157279,+ | ||
}} | }} |
Latest revision as of 03:47, 28 July 2015
Short description: | p@chr1:215157270..215157279, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:215157270..215157279, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 6.96e-21 | 2 |
mesenchymal stem cell of adipose | 9.92e-21 | 8 |
fibroblast of tunica adventitia of artery | 2.53e-11 | 4 |
fibroblast of the aortic adventitia | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.51e-12 | 14 |
artery wall | 2.53e-11 | 4 |
tunica adventitia of artery | 2.53e-11 | 4 |
adventitia | 2.53e-11 | 4 |
tunica adventitia of blood vessel | 2.53e-11 | 4 |
aorta tunica adventitia | 2.53e-11 | 4 |
aorta wall | 2.53e-11 | 4 |
left ovary | 2.80e-11 | 4 |
hypodermis | 3.49e-09 | 5 |
blood vessel layer | 5.08e-07 | 7 |