FFCP PHASE1:Hg19::chr1:21571555..21571562,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:21571555..21571562,+ | |||
|description=CAGE_peak_at_chr1:21571555..21571562,+ | |||
|id=chr1:21571555..21571562,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000071;3.62e-23;18!CL:0002139;1.55e-21;24!CL:1000413;9.43e-19;9!CL:0000115;9.79e-16;36!CL:0002545;9.36e-15;2!CL:0002575;1.19e-14;2!CL:0002544;9.14e-11;6!CL:0002078;1.27e-10;45!CL:0002144;2.05e-10;3!CL:0000669;9.30e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,3.44e-23,18;CL:0002546,3.44e-23,18;CL:0002139,1.90e-21,24;CL:1000413,8.98e-19,9;CL:0000115,3.77e-17,36;CL:0002545,5.24e-15,2;CL:0002575,8.49e-15,2;CL:0002078,2.23e-13,45;CL:0002544,8.44e-11,6;CL:0002144,1.92e-10,3;CL:0000213,5.38e-10,58;CL:0000215,5.38e-10,58;CL:0000669,7.87e-08,4 | |||
|ontology_enrichment_development_v019=CL:0002546;3.62e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003134!4.61e-07!37;UBERON:0000474!4.61e-07!37;UBERON:0004872!6.88e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.62e-23;18!UBERON:0001986;3.62e-23;18!UBERON:0004852;3.62e-23;18!UBERON:0003915;9.43e-19;9!UBERON:0004700;9.43e-19;9!UBERON:0001917;9.43e-19;9!UBERON:0000487;9.43e-19;22!UBERON:0006914;2.30e-16;25!UBERON:0005800;9.36e-15;2!UBERON:0001515;9.36e-15;2!UBERON:0000490;4.71e-11;33!UBERON:0010523;2.05e-10;3!UBERON:0001915;2.05e-10;3!UBERON:0001982;2.05e-10;3!UBERON:0001637;2.15e-08;42!UBERON:0003509;2.15e-08;42!UBERON:0004572;2.15e-08;42!UBERON:0003914;2.33e-08;74!UBERON:0007500;1.70e-07;56!UBERON:0001981;1.70e-07;56!UBERON:0004537;1.70e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.44e-23,18;UBERON:0001986,3.44e-23,18;UBERON:0004852,3.44e-23,18;UBERON:0003915,8.98e-19,9;UBERON:0004700,8.98e-19,9;UBERON:0001917,8.98e-19,9;UBERON:0000487,9.06e-19,22;UBERON:0006914,2.22e-16,25;UBERON:0005800,5.24e-15,2;UBERON:0001515,5.24e-15,2;UBERON:0004535,1.29e-12,109;UBERON:0001009,3.43e-12,112;UBERON:0000055,5.23e-12,68;UBERON:0007500,6.71e-12,59;UBERON:0001981,6.71e-12,59;UBERON:0004537,6.71e-12,59;UBERON:0006965,6.71e-12,59;UBERON:0003914,1.23e-11,117;UBERON:0004872,2.70e-11,83;UBERON:0010523,1.92e-10,3;UBERON:0001915,1.92e-10,3;UBERON:0001982,1.92e-10,3;UBERON:0002049,3.49e-10,78;UBERON:0007798,3.49e-10,78;UBERON:0001637,3.94e-09,42;UBERON:0003509,3.94e-09,42;UBERON:0004572,3.94e-09,42;UBERON:0004573,8.01e-07,33;UBERON:0004571,8.01e-07,33 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.37129905888014,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,1.22433556948361,0,0,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.0945348171640679,0.665188192387692,0.175669571386252,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0,1.04142150482278,0.56530794192401,2.51699661725944,1.10047216776027,0.208994966536811,0,0,0.66944122552934,3.62546385398232,0,2.68468263302986,3.67663080345869,1.62028389576352,0.446498641420399,0.22452937262617,0.112611480483322,0,0,1.09921046358244,0,0,0.436094052142534,0,0.25326102332916,0,0.860509862246441,1.06400514659507,1.68203280042692,0,1.48000529050296,0,0.942974704487816,0,0,0.576175924479999,0.234321431833797,0.624320153660641,0,0,0,0,0,0.204154171254893,0,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0.453728732640084,0.179389635688862,0.427114777637135,0,0.300091096084402,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.184099797284599,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0,0,0,2.57296375277154,0,0,0,0,0,0,0.441175890929576,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0.579652024875384,0.117408694235822,1.01056513432752,0,0.570762456703795,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0.958499421966331,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0,0.271265023699736,0.207970861530807,0.892144943985809,0.157702415033935,0,0,0,1.03473071292505,0,0,0.260650843404249,2.54541504701563,1.37257369524342,0,0,0.213455115606889,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0,0.256278298511402,1.02341449813341,0.321707842287215,0,0.154209693802656,0.355123450626254,0,1.03850885836724,0.581051892299796,0,0,0,0.114814448164607,0.728364672026868,0.262248829918848,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.211103257785751,2.27466768141793,0.680374821106063,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.267096106940212,0.495854746082934,0,0.127612712494584,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.353437207037059,0.808729926293264,0,0.842516912477962,0,0.731140468893853,1.05650146756755,0.272999822815972,0.282810863907425,0,0,1.99031692572366,0.876901770507525,0.578775534266688,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,1.13929437434833,0,0,1.29694662238543,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0,0.222617410045812,0.329607748453519,0,0.19924798825107,0,0.251932747854276,0.715880777515084,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0.557694977114413,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,1.06606955203727,0,0,0.166211681900156,0,0,0,0.189753732724185,0.158936578980379,0.843992258112108,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.416024019039416,0.173559738335131,0,0.0870592065804026,0,0.51595809741485,0.0967563312890851,0.146178634172371,0,0.0969890164884194,0,0.225980740780532,0.548167698587004,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0.343189995723929,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0,0,0.0674035438541849,0,0.254019996197353,0,0,0.321506296930038,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0.25426853765475,1.08599920350743,0.864221491201268,0.979762080328227,0,0.082092520749339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| |||
|short_description=p@chr1:21571555..21571562,+ | |||
}} |
Latest revision as of 03:49, 28 July 2015
Short description: | p@chr1:21571555..21571562, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:21571555..21571562, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 3.44e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.44e-23 | 18 |
endothelial cell of vascular tree | 1.90e-21 | 24 |
endothelial cell of artery | 8.98e-19 | 9 |
endothelial cell | 3.77e-17 | 36 |
thoracic aorta endothelial cell | 5.24e-15 | 2 |
central nervous system pericyte | 8.49e-15 | 2 |
meso-epithelial cell | 2.23e-13 | 45 |
aortic endothelial cell | 8.44e-11 | 6 |
capillary endothelial cell | 1.92e-10 | 3 |
lining cell | 5.38e-10 | 58 |
barrier cell | 5.38e-10 | 58 |
pericyte cell | 7.87e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.44e-23 | 18 |
endothelium | 3.44e-23 | 18 |
cardiovascular system endothelium | 3.44e-23 | 18 |
endothelial tube | 8.98e-19 | 9 |
arterial system endothelium | 8.98e-19 | 9 |
endothelium of artery | 8.98e-19 | 9 |
simple squamous epithelium | 9.06e-19 | 22 |
squamous epithelium | 2.22e-16 | 25 |
segment of aorta | 5.24e-15 | 2 |
thoracic aorta | 5.24e-15 | 2 |
cardiovascular system | 1.29e-12 | 109 |
circulatory system | 3.43e-12 | 112 |
vessel | 5.23e-12 | 68 |
epithelial tube open at both ends | 6.71e-12 | 59 |
blood vessel | 6.71e-12 | 59 |
blood vasculature | 6.71e-12 | 59 |
vascular cord | 6.71e-12 | 59 |
epithelial tube | 1.23e-11 | 117 |
splanchnic layer of lateral plate mesoderm | 2.70e-11 | 83 |
microcirculatory vessel | 1.92e-10 | 3 |
endothelium of capillary | 1.92e-10 | 3 |
capillary | 1.92e-10 | 3 |
vasculature | 3.49e-10 | 78 |
vascular system | 3.49e-10 | 78 |
artery | 3.94e-09 | 42 |
arterial blood vessel | 3.94e-09 | 42 |
arterial system | 3.94e-09 | 42 |
systemic artery | 8.01e-07 | 33 |
systemic arterial system | 8.01e-07 | 33 |