FFCP PHASE1:Hg19::chr1:236141181..236141196,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:236141181..236141196,- | |||
|coexpression_cluster_id=C932 | |||
|description=CAGE_peak_at_chr1:236141181..236141196,- | |description=CAGE_peak_at_chr1:236141181..236141196,- | ||
|id=chr1:236141181..236141196,- | |id=chr1:236141181..236141196,- | ||
|ontology_enrichment_celltype=CL:0000057!1.99e-16!75;CL:0000055!1.51e-14!180;CL:0002620!3.43e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.99e-16!75;CL:0000055!1.51e-14!180;CL:0002620!3.43e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.24e-09;13!CL:0002615;2.71e-09;3!CL:0002195;6.69e-07;2!CL:0002571;6.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.41e-09,3;CL:0000136,5.75e-08,15;CL:0002195,5.95e-07,2;CL:0002571,5.95e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!9.14e-08!95 | |ontology_enrichment_uberon=UBERON:0003102!9.14e-08!95 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.28e-07,46;UBERON:0002416,1.28e-07,46 | |||
|phase1_expression=1.63510541343501,6.42301571672949,2.11431606143957,3.00219895059391,4.91657203870017,0.872338524100369,0,1.26343974685366,2.87304191019822,0,0,0,0,0.37129905888014,0.662794751455832,0,1.20538905604795,0,0.975865597581014,0,0.204000691244253,0.626909442956176,0,0.273748850145768,0.125542639594803,0.305653622991805,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0.822335776043652,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,0.545812300115692,0,0,0.320929027076094,0,0,0,0.426224750532694,0,1.13477044938228,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.736555271975129,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0,0.579386075843295,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,0.71153252537342,1.67360306382335,0,0.760272105718513,5.36936526605973,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.12663051166458,0,2.29469296599051,0.354668382198357,0,0,0.24666754841716,0,0.808264032418128,0.817309515567294,2.57307626996383,1.72852777344,1.64025002283658,0.312160076830321,0,2.24173020827702,0.352303495931295,0,0.280901613404497,0.408308342509787,0.491337269247072,1.85986406116378,3.56400857184616,0.494533858557114,0,2.15585442544872,0.673344455816265,0.875829639103749,0.554128230968366,0.438977620880838,0.612975591598039,0.150238058906597,0.226864366320042,0.89694817844431,1.92201649936711,1.48352330811693,2.70081986475962,0.618315175430633,1.54584324027377,0.744467425326359,1.85653965465393,0.389748020644795,0.757301322732344,0.368199594569197,0.323292113637624,1.06502877754984,0.806016785821122,0.339121184620975,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,1.28648187638577,0,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.8231480226628,0,2.53510069643662,1.96565443335525,0,0,0.245976877086227,0.857839051492628,0.109750285408626,0,0,0,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0.224262168690721,0.43596006883328,0.4400297149257,0.129271715757778,0,0,2.6593811658487,2.08014873822732,0.514414748524284,0,0,6.57698770827479,20.0769993994834,0.823240336780769,0.65147236858747,3.909311436168,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0.868687840005475,3.6985738059069,0.358121926479791,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,3.18997878469764,1.50051156317903,0.813795071099207,0.623912584592421,1.42743191037729,0.630809660135739,0.234282829985426,0,0,0,1.99267679560631,0.184369168541703,0.521301686808497,1.17480694477644,3.0882908142977,0,0,0,0,0,0,0.248107807818777,0.306923946576125,1.40330047216537,0.768834895534206,0.511707249066704,0.965123526861645,1.48418066444991,0.462629081407967,0.177561725313127,0.164254312027618,1.03850885836724,0.464841513839837,0.241718899183244,0.40101294060657,0,1.14814448164607,1.27463817604702,0.917870904715969,0,0,0,0,0.105551628892876,3.4120015221269,0.340187410553031,0.863663664408557,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0,0,0.650060246036521,0,0.290012154876366,0.462145851343933,0.614014698904518,0,1.07420244868274,0.870100163485371,0.852266274161009,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,1.116475108079,0.316379424718726,0.38126038784765,0.255897791311334,1.71175595213568,0.636406495851874,0,1.2591072030832,0.54907405947211,0.824686816419805,0,0,0,0.48763373908959,1.70599442741899,0,1.63799893689583,4.3835683905651,0,0.551365343546124,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0.633322905892992,0.658589785919804,0.379473173765715,1.04980416073495,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0.912938716132769,0,0,0,0,0,0,0,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0.697118721393016,0.538651809526579,0,0.69169171316418,0.807818799687949,0.434589487688032,0,0.732780747214898,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.282706142867882,0,0,0,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0,3.62972148145992,0.30607276163049,0.252746318513952,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.290967049465258,0,2.25980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0.124252535565433,0.235694034616795,0.543616824294456,0.313808538937,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.739018197353989,0,0,0.945398187686684,0.906574442192831,0.808842526250219,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0.83088067605837,0,0,0,1.34173875039706,0.236417121897595,0.681909645754975,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0.653174720218818,0,0,0.170388021785422,0.453248366080503,0.293104467356165,0,0,0,0.171086837884329,0,0.427149650270779,0.628817220398664,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.488105059607853,0.1251909307065,0.573409195690071,0.221858103073705,0,0,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0.378806010550178,0.50313580350515,0.889811221596536,0.228840068396924,0.453692771289717,0.15543720058278,0.147855149989634,0.63718706865481,0,0.465788870628778,1.65882483136342,0.53168342911599,1.04349012362347,0.300515217994437,0,0.406870733204662,0.181848659202559,0.214821114084977,0,2.3885753321917,1.20008329398946,0.343395705182793,0.336749488765919,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0.506827321959218,0.256241518587947,0.345430341731199,0.911579868532147,0,0.389720617678777,0.132864840313363,0,0.982829546539238,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0.431299245586727,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0.300841313397029,0.40341013740704,0.781514011233092,0,0.327543835020193,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0.576169937778896,0.171488009437418,0,0,0.118193840883968,0,0.156986185701028,0,0,0.913158720509496,0.863710364874486,0.47775168788705,0.214429632529969,0,0,0.173858272302579,1.60342272946051,0.207216164163037,0.3414369541879,0,0,0,0.0852134047591577,1.27016115057279,0,0,0,0,0,0,0,0.205325613712494,0,1.94284397223656,0,0,0.118920090777569,0,0,0.301925687133347,0,1.09279780251979,0,1.22574160876953,0,0.196308467114945,0,0.4226557275834,0.849635573439084,0.187967835959707,0.515663103788617,0,0,0,0,0,0,0.143339583151451,0.631086248772738,0,0,3.1741610430924,1.85997509083376,0.462175628631418,0.865253124247578,0.252332849670158,0.109265571963696,0,0,1.60330443159336,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,1.42838658878244,0,0.124149428591716,0.448527450322454,0.25458863311266,1.21270313374932,0.435433495793923,0.684466602170562,0.0673520530145875,0.286888821570705,0.665320713092027,0.0814032686109745,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0.320568492303233 | |phase1_expression=1.63510541343501,6.42301571672949,2.11431606143957,3.00219895059391,4.91657203870017,0.872338524100369,0,1.26343974685366,2.87304191019822,0,0,0,0,0.37129905888014,0.662794751455832,0,1.20538905604795,0,0.975865597581014,0,0.204000691244253,0.626909442956176,0,0.273748850145768,0.125542639594803,0.305653622991805,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0.822335776043652,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,0.545812300115692,0,0,0.320929027076094,0,0,0,0.426224750532694,0,1.13477044938228,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.736555271975129,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0,0.579386075843295,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,0.71153252537342,1.67360306382335,0,0.760272105718513,5.36936526605973,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.12663051166458,0,2.29469296599051,0.354668382198357,0,0,0.24666754841716,0,0.808264032418128,0.817309515567294,2.57307626996383,1.72852777344,1.64025002283658,0.312160076830321,0,2.24173020827702,0.352303495931295,0,0.280901613404497,0.408308342509787,0.491337269247072,1.85986406116378,3.56400857184616,0.494533858557114,0,2.15585442544872,0.673344455816265,0.875829639103749,0.554128230968366,0.438977620880838,0.612975591598039,0.150238058906597,0.226864366320042,0.89694817844431,1.92201649936711,1.48352330811693,2.70081986475962,0.618315175430633,1.54584324027377,0.744467425326359,1.85653965465393,0.389748020644795,0.757301322732344,0.368199594569197,0.323292113637624,1.06502877754984,0.806016785821122,0.339121184620975,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,1.28648187638577,0,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.8231480226628,0,2.53510069643662,1.96565443335525,0,0,0.245976877086227,0.857839051492628,0.109750285408626,0,0,0,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0.224262168690721,0.43596006883328,0.4400297149257,0.129271715757778,0,0,2.6593811658487,2.08014873822732,0.514414748524284,0,0,6.57698770827479,20.0769993994834,0.823240336780769,0.65147236858747,3.909311436168,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0.868687840005475,3.6985738059069,0.358121926479791,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,3.18997878469764,1.50051156317903,0.813795071099207,0.623912584592421,1.42743191037729,0.630809660135739,0.234282829985426,0,0,0,1.99267679560631,0.184369168541703,0.521301686808497,1.17480694477644,3.0882908142977,0,0,0,0,0,0,0.248107807818777,0.306923946576125,1.40330047216537,0.768834895534206,0.511707249066704,0.965123526861645,1.48418066444991,0.462629081407967,0.177561725313127,0.164254312027618,1.03850885836724,0.464841513839837,0.241718899183244,0.40101294060657,0,1.14814448164607,1.27463817604702,0.917870904715969,0,0,0,0,0.105551628892876,3.4120015221269,0.340187410553031,0.863663664408557,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0,0,0.650060246036521,0,0.290012154876366,0.462145851343933,0.614014698904518,0,1.07420244868274,0.870100163485371,0.852266274161009,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,1.116475108079,0.316379424718726,0.38126038784765,0.255897791311334,1.71175595213568,0.636406495851874,0,1.2591072030832,0.54907405947211,0.824686816419805,0,0,0,0.48763373908959,1.70599442741899,0,1.63799893689583,4.3835683905651,0,0.551365343546124,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0.633322905892992,0.658589785919804,0.379473173765715,1.04980416073495,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0.912938716132769,0,0,0,0,0,0,0,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0.697118721393016,0.538651809526579,0,0.69169171316418,0.807818799687949,0.434589487688032,0,0.732780747214898,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.282706142867882,0,0,0,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0,3.62972148145992,0.30607276163049,0.252746318513952,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.290967049465258,0,2.25980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0.124252535565433,0.235694034616795,0.543616824294456,0.313808538937,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.739018197353989,0,0,0.945398187686684,0.906574442192831,0.808842526250219,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0.83088067605837,0,0,0,1.34173875039706,0.236417121897595,0.681909645754975,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0.653174720218818,0,0,0.170388021785422,0.453248366080503,0.293104467356165,0,0,0,0.171086837884329,0,0.427149650270779,0.628817220398664,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.488105059607853,0.1251909307065,0.573409195690071,0.221858103073705,0,0,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0.378806010550178,0.50313580350515,0.889811221596536,0.228840068396924,0.453692771289717,0.15543720058278,0.147855149989634,0.63718706865481,0,0.465788870628778,1.65882483136342,0.53168342911599,1.04349012362347,0.300515217994437,0,0.406870733204662,0.181848659202559,0.214821114084977,0,2.3885753321917,1.20008329398946,0.343395705182793,0.336749488765919,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0.506827321959218,0.256241518587947,0.345430341731199,0.911579868532147,0,0.389720617678777,0.132864840313363,0,0.982829546539238,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0.431299245586727,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0.300841313397029,0.40341013740704,0.781514011233092,0,0.327543835020193,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0.576169937778896,0.171488009437418,0,0,0.118193840883968,0,0.156986185701028,0,0,0.913158720509496,0.863710364874486,0.47775168788705,0.214429632529969,0,0,0.173858272302579,1.60342272946051,0.207216164163037,0.3414369541879,0,0,0,0.0852134047591577,1.27016115057279,0,0,0,0,0,0,0,0.205325613712494,0,1.94284397223656,0,0,0.118920090777569,0,0,0.301925687133347,0,1.09279780251979,0,1.22574160876953,0,0.196308467114945,0,0.4226557275834,0.849635573439084,0.187967835959707,0.515663103788617,0,0,0,0,0,0,0.143339583151451,0.631086248772738,0,0,3.1741610430924,1.85997509083376,0.462175628631418,0.865253124247578,0.252332849670158,0.109265571963696,0,0,1.60330443159336,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,1.42838658878244,0,0.124149428591716,0.448527450322454,0.25458863311266,1.21270313374932,0.435433495793923,0.684466602170562,0.0673520530145875,0.286888821570705,0.665320713092027,0.0814032686109745,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0.320568492303233 | ||
|short_description=p@chr1:236141181..236141196,- | |short_description=p@chr1:236141181..236141196,- | ||
}} | }} |
Latest revision as of 05:25, 28 July 2015
Short description: | p@chr1:236141181..236141196, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236141181..236141196, - |
Coexpression cluster: | C932_Mesenchymal_Adipocyte_Endothelial_Fibroblast_Renal_Pericytes_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.41e-09 | 3 |
fat cell | 5.75e-08 | 15 |
hepatic stem cell | 5.95e-07 | 2 |
hepatic mesenchymal stem cell | 5.95e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
integument | 1.28e-07 | 46 |
integumental system | 1.28e-07 | 46 |