FFCP PHASE1:Hg19::chr1:27992888..27992908,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:27992888..27992908,+ | |||
|coexpression_cluster_id=C1244 | |||
|description=CAGE_peak_at_chr1:27992888..27992908,+ | |description=CAGE_peak_at_chr1:27992888..27992908,+ | ||
|id=chr1:27992888..27992908,+ | |id=chr1:27992888..27992908,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;3.76e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.40e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,3.12872766099101,3.48935409640147,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0.331397375727916,1.34465029290355,0,0,0,0,0,0.940364164434263,0.286235987131057,0,0.125542639594803,0.229240217243854,0,0,0,0,0.464448369948228,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0.647787332037959,0.257575567634187,0.290796477559129,0,0,0,0,0.309706370895104,0.575384784644301,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0.870627715885752,0,1.24564449799115,0.502497330513487,0,0,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.512365278902701,0.260118695119756,0.822189523018381,0.552700035571697,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,1.24430121722827,0,0,0,0.348259474598534,0.930705723632056,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0.71153252537342,0,0,0,0.976248230192678,0,1.62028389576352,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0,1.12135520028461,0,3.45334567784024,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,13.0680314301026,8.90160945402805,0,0,0,0,0,0,0,6.46023653298366,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.339121184620975,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,2.57296375277154,0,0,1.44375896333917,0.709840800239063,0.505754070234305,0.723033089650446,0.441175890929576,1.08939722046203,0.71181185733329,1.48314438976181,0.784885860501384,1.92373578473195,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.904760751704678,0.0925884451585296,2.6064664424826,0,0,0.231860809950154,0,0.721832238805369,0.462985512576611,0,1.58040879591855,0,1.96973604869918,3.27605971194933,2.37809859661965,0,2.18376766658517,0.850650583454319,0,0,0,0,0.088048434013226,0,0,0,0.507983154337352,0.763976851116555,0,0,0,2.10240140490742,6.00235508524214,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.399891964728228,3.64871341923571,1.50677127429638,0,0,1.14861935834114,0,2.02693829334611,0,0,0.560425719967636,0,0.215627574859517,0.385029108839245,0,0,1.54657762555539,0,0,0,2.99161459204025,0.414415513436035,0,0.500170521059677,0.271265023699736,0.623912584592421,0.713715955188647,0.630809660135739,0.117141414992713,0,0,0,0,0,0,1.17480694477644,1.02943027143257,0.206768026122887,0.215714200818617,0.106727557803444,0,1.66435439510497,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,1.03850885836724,0.929683027679674,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0.328014645699706,0.325378394664303,0.515205058238611,0,0.165018999841176,0,0,0,0.386682873168488,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,21.8703841925023,0,0,0,0,0.372158369359667,1.2655176988749,0,0,0,1.27281299170375,2.35484592059769,0.359744915166629,0.274537029736055,0,0,0,0,0.48763373908959,34.1198885483798,0,0.136499911407986,0,2.26016233240486,0.551365343546124,3.98063385144732,15.7842318691355,0,0,0,0.92947049429925,0.845086807596724,0,0,0,0.709522128141196,7.38876723541824,2.30506425071931,0,0.349934720244983,0,0,0,0.470719003883896,2.58303223602738,11.7930032967338,2.66058092122005,0.689170200620878,0.507447609232169,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,1.11362469558097,0,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0,3.58116727106535,1.78178808499583,0.614321404198464,0,0,0.556543525114529,2.63686198762815,0,1.59398390600856,0,0,0,0,0,0,2.14825409610731,0,0.0986434056369336,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0.583209226766509,0,0,0.120596438625408,0,0,0.591095237907095,0,0.871507708151921,0,0,0.455768223388005,1.84451123510448,0.179515288819544,5.54101596802241,4.78501739597879,0.366390373607449,4.79731298416771,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0,1.18375320854817,1.20990716048664,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0.51595809741485,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0.137041924646751,0.19871461170299,0.126621591911757,5.27988733383968,0.0801588202515337,0.213452994739353,1.59847687665704,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0.288950589901519,0.600420288709789,0,0,0,0,0.558564802544508,0,0,3.79390100948083,3.004582336956,0.223171457441873,0,0.720599767084807,0,0.0787831823072236,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.633602019116439,0,0,0,0,0,0,0,0,0,1.23138781124008,0.170388021785422,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0.285465333544967,16.2333415591738,0,0.144921028610825,0.149254802886874,0.467426619694449,0.554805861502613,0.189403005275089,1.0062716070103,6.22867855117575,0.228840068396924,0.604923695052956,1.24349760466224,2.21782724984451,0.318593534327405,0,0,1.24411862352257,0.265841714557995,0,0.450772826991655,0,0.813741466409323,0.363697318405119,0.107410557042488,0.464033759878494,0,0.400027764663154,0.343395705182793,0.336749488765919,0,1.15571898244382,5.57548137574807,2.87093721161733,0,0,17.1315693154527,0,0,0.438568099157414,0,0,4.39250345697989,0,0.345430341731199,3.3424595179512,0,0,0,0.163565394255844,6.22458712808184,2.94927490504463,0,0.59996218756479,0,2.75543967457305,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0.318004350653419,0,0,0.705351887381368,9.18736432059601,0.192687675289379,0,0,0,0,0,0,1.42769420259154,0.294443155503077,0,0.550285795565037,0,0,0,0.397832444232549,0,0.40341013740704,0,7.59529413996125,0,0.443568258651136,0.0675375846183947,0.781078098613847,0.206686796501184,0,0,0,0.496211178389294,0,0.511049710558381,0,0.336283722218824,0,0,0.79832133146375,0.576169937778896,0.171488009437418,0.0679697329768317,0.131545547125698,0,0.222462803784138,0.078493092850514,0,1.68163297988273,0,0.215927591218621,2.38875843943525,0.214429632529969,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.447421727191169,0.294450700845729,0.243835849964539,0,0,0,0,0,0,0,0,0,1.35866559210006,0.0771741581079447,0.437119121007915,0.470317296361523,0.245148321753905,0,0,0.297046400327086,1.2679671827502,0,0.0939839179798536,0,0.0999411559249289,1.07132363163395,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0.5290268405154,2.60396512716726,0,1.73050624849516,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0.33639558774184,0.25458863311266,0.404234377916439,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | |phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,3.12872766099101,3.48935409640147,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0.331397375727916,1.34465029290355,0,0,0,0,0,0.940364164434263,0.286235987131057,0,0.125542639594803,0.229240217243854,0,0,0,0,0.464448369948228,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0.647787332037959,0.257575567634187,0.290796477559129,0,0,0,0,0.309706370895104,0.575384784644301,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0.870627715885752,0,1.24564449799115,0.502497330513487,0,0,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.512365278902701,0.260118695119756,0.822189523018381,0.552700035571697,0,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,1.24430121722827,0,0,0,0.348259474598534,0.930705723632056,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0.71153252537342,0,0,0,0.976248230192678,0,1.62028389576352,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0,1.12135520028461,0,3.45334567784024,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,13.0680314301026,8.90160945402805,0,0,0,0,0,0,0,6.46023653298366,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.339121184620975,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,2.57296375277154,0,0,1.44375896333917,0.709840800239063,0.505754070234305,0.723033089650446,0.441175890929576,1.08939722046203,0.71181185733329,1.48314438976181,0.784885860501384,1.92373578473195,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.904760751704678,0.0925884451585296,2.6064664424826,0,0,0.231860809950154,0,0.721832238805369,0.462985512576611,0,1.58040879591855,0,1.96973604869918,3.27605971194933,2.37809859661965,0,2.18376766658517,0.850650583454319,0,0,0,0,0.088048434013226,0,0,0,0.507983154337352,0.763976851116555,0,0,0,2.10240140490742,6.00235508524214,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.399891964728228,3.64871341923571,1.50677127429638,0,0,1.14861935834114,0,2.02693829334611,0,0,0.560425719967636,0,0.215627574859517,0.385029108839245,0,0,1.54657762555539,0,0,0,2.99161459204025,0.414415513436035,0,0.500170521059677,0.271265023699736,0.623912584592421,0.713715955188647,0.630809660135739,0.117141414992713,0,0,0,0,0,0,1.17480694477644,1.02943027143257,0.206768026122887,0.215714200818617,0.106727557803444,0,1.66435439510497,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,1.03850885836724,0.929683027679674,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0.328014645699706,0.325378394664303,0.515205058238611,0,0.165018999841176,0,0,0,0.386682873168488,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,21.8703841925023,0,0,0,0,0.372158369359667,1.2655176988749,0,0,0,1.27281299170375,2.35484592059769,0.359744915166629,0.274537029736055,0,0,0,0,0.48763373908959,34.1198885483798,0,0.136499911407986,0,2.26016233240486,0.551365343546124,3.98063385144732,15.7842318691355,0,0,0,0.92947049429925,0.845086807596724,0,0,0,0.709522128141196,7.38876723541824,2.30506425071931,0,0.349934720244983,0,0,0,0.470719003883896,2.58303223602738,11.7930032967338,2.66058092122005,0.689170200620878,0.507447609232169,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,1.11362469558097,0,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0,3.58116727106535,1.78178808499583,0.614321404198464,0,0,0.556543525114529,2.63686198762815,0,1.59398390600856,0,0,0,0,0,0,2.14825409610731,0,0.0986434056369336,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0.583209226766509,0,0,0.120596438625408,0,0,0.591095237907095,0,0.871507708151921,0,0,0.455768223388005,1.84451123510448,0.179515288819544,5.54101596802241,4.78501739597879,0.366390373607449,4.79731298416771,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0,1.18375320854817,1.20990716048664,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0.51595809741485,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0.137041924646751,0.19871461170299,0.126621591911757,5.27988733383968,0.0801588202515337,0.213452994739353,1.59847687665704,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0.288950589901519,0.600420288709789,0,0,0,0,0.558564802544508,0,0,3.79390100948083,3.004582336956,0.223171457441873,0,0.720599767084807,0,0.0787831823072236,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.633602019116439,0,0,0,0,0,0,0,0,0,1.23138781124008,0.170388021785422,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0.285465333544967,16.2333415591738,0,0.144921028610825,0.149254802886874,0.467426619694449,0.554805861502613,0.189403005275089,1.0062716070103,6.22867855117575,0.228840068396924,0.604923695052956,1.24349760466224,2.21782724984451,0.318593534327405,0,0,1.24411862352257,0.265841714557995,0,0.450772826991655,0,0.813741466409323,0.363697318405119,0.107410557042488,0.464033759878494,0,0.400027764663154,0.343395705182793,0.336749488765919,0,1.15571898244382,5.57548137574807,2.87093721161733,0,0,17.1315693154527,0,0,0.438568099157414,0,0,4.39250345697989,0,0.345430341731199,3.3424595179512,0,0,0,0.163565394255844,6.22458712808184,2.94927490504463,0,0.59996218756479,0,2.75543967457305,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0.318004350653419,0,0,0.705351887381368,9.18736432059601,0.192687675289379,0,0,0,0,0,0,1.42769420259154,0.294443155503077,0,0.550285795565037,0,0,0,0.397832444232549,0,0.40341013740704,0,7.59529413996125,0,0.443568258651136,0.0675375846183947,0.781078098613847,0.206686796501184,0,0,0,0.496211178389294,0,0.511049710558381,0,0.336283722218824,0,0,0.79832133146375,0.576169937778896,0.171488009437418,0.0679697329768317,0.131545547125698,0,0.222462803784138,0.078493092850514,0,1.68163297988273,0,0.215927591218621,2.38875843943525,0.214429632529969,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.447421727191169,0.294450700845729,0.243835849964539,0,0,0,0,0,0,0,0,0,1.35866559210006,0.0771741581079447,0.437119121007915,0.470317296361523,0.245148321753905,0,0,0.297046400327086,1.2679671827502,0,0.0939839179798536,0,0.0999411559249289,1.07132363163395,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0.5290268405154,2.60396512716726,0,1.73050624849516,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0.33639558774184,0.25458863311266,0.404234377916439,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr1:27992888..27992908,+ | |short_description=p@chr1:27992888..27992908,+ | ||
}} | }} |
Latest revision as of 06:51, 28 July 2015
Short description: | p@chr1:27992888..27992908, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27992888..27992908, + |
Coexpression cluster: | C1244_Smooth_mesenchymal_Fibroblast_mesothelioma_gall_Melanocyte_meningioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.40e-09 | 6 |