FFCP PHASE1:Hg19::chr1:33236546..33236551,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:33236546..33236551,- | |||
|description=CAGE_peak_at_chr1:33236546..33236551,- | |||
|id=chr1:33236546..33236551,- | |||
|ontology_enrichment_celltype=CL:0000066!1.52e-32!254;CL:0002076!5.86e-08!43;CL:1000507!1.99e-07!12;CL:1000494!1.99e-07!12;CL:0002251!9.82e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.12e-10;4!CL:0000731;2.12e-10;4!CL:0002159;2.26e-09;14!CL:0000575;1.05e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.69e-18,253;CL:0000244,2.18e-10,4;CL:0000731,2.18e-10,4;CL:0002159,2.05e-09,14;CL:0000575,1.34e-08,2;CL:0000076,8.55e-08,63;CL:0002077,1.05e-07,34;CL:0000240,9.69e-07,6;CL:0000311,9.69e-07,6;CL:0000079,9.69e-07,6;CL:0000237,9.69e-07,6;CL:0000036,9.69e-07,6;CL:0000357,9.69e-07,6;CL:0000114,9.69e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.78e-19!106;DOID:0050687!3.62e-15!143;DOID:162!1.85e-08!235;DOID:14566!4.62e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.57e-12!169;UBERON:0000925!3.57e-12!169;UBERON:0006595!3.57e-12!169;UBERON:0000064!7.22e-09!219;UBERON:0001007!7.93e-09!155;UBERON:0001555!7.93e-09!155;UBERON:0007026!7.93e-09!155;UBERON:0006554!1.87e-08!44;UBERON:0001008!5.15e-08!45;UBERON:0000058!6.56e-08!26;UBERON:0009773!1.99e-07!12;UBERON:0001231!1.99e-07!12;UBERON:0004810!1.99e-07!12;UBERON:0001004!4.58e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.16e-08;5!UBERON:0006554;1.64e-07;30!UBERON:0001008;1.64e-07;30!UBERON:0005910;4.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.21e-08,5;UBERON:0005910,4.86e-07,6;UBERON:0006554,9.35e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0.816002764977012,0,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0.665188192387692,0.351339142772504,0.130979075497713,1.09288586487763,1.48313777113772,0,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.976248230192678,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,3.48875241714027,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0.24666754841716,0,0,0.490385709340376,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.368199594569197,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0.545492241181669,0.573609190778008,0.487894824518382,0.132529768321485,0.69716365721711,0.414644220061482,1.51392510525377,0,0,1.28648187638577,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.55146986366197,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0.343135620597051,1.64625428112938,0,1.91005047582099,1.75918045801206,0,0,0,0.231860809950154,0,0.288732895522148,0,0,2.37061319387782,1.71697232418975,0,0,0.148631162288728,0.93733833986777,1.00789276919316,0.708875486211932,1.07470227243418,0,0.383382679165211,0,0.792435906119034,0.414656231081544,0.288239906833923,0.25248486685276,0.126995788584338,0,0,1.71072446022705,0.616964956219941,0,0,0,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.831883446123229,0.356857977594324,0.473107245101804,0.117141414992713,0,0,0,0,0,0.173767228936166,0.783204629850962,0.343143423810856,0,0,0,0.909382714338778,0,1.5119514666484,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.601519410909855,1.47329582297434,0.229628896329213,0,0.917870904715969,0.902399225814824,0.847168708148562,0.784349769176855,1.46139224653261,0.949964660035881,0,0.510281115829547,0.215915916102139,0,0.812839312631559,1.00337954770971,2.03901018436031,1.66215201785745,0.671624264166535,0.219259876645935,0,1.28225062558195,0.328014645699706,0,0.103041011647722,0.27470839445503,0.247528499761764,0,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.178064071293475,1.15699440752685,0.576570202095319,0.127612712494584,0.6069466851333,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,3.44404298136984,3.36942951335251,3.54744122829341,0.689170200620878,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,2.20536194382929,0,0,0,0,0,0.191505370132367,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0.242721043499027,0,0.568272293612826,0.23874448473769,0.296964680832639,0.614321404198464,0,0.140669416410513,0.445234820091624,0,0.211125408127993,0.796991953004279,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0.718946809178615,1.43216939740487,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.962059999958153,0,1.593108275997,0.762760950878299,1.65471377237555,0.344743373241465,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0,0,0,0.21787692703798,0.697118721393016,0,0,0.23056390438806,0.628303510868405,0.869178975376065,0.31900115973192,0.274792780205587,1.06606955203727,0,0,0.166211681900156,0,0.392125068635479,0.167821586975843,0,0.317873157960757,0.632994193584081,0,0.141353071433941,0,2.98578579323551,0.353830258013357,0.611030144933625,0,0,0,0.134802265961354,0,0,0,1.17398771359254,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0.284609546029793,0.277349346026277,1.38847790668105,0.489961987071888,0.609414446062818,0,0,1.16107597546902,0.65780385377567,0.492692742319255,0.0969890164884194,0,0,0.274083849293502,0,0.379864775735272,0.195551382734803,0.240476460754601,0.640358984218058,0.39961921916426,0.144090417154106,0.114536596165916,1.02956998717179,0.14405479798815,0.124252535565433,0.942776138467182,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,1.39775300349294,0,0,0,0,0,0.236349546921671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| |||
|short_description=p@chr1:33236546..33236551,- | |||
}} |
Latest revision as of 07:23, 28 July 2015
Short description: | p@chr1:33236546..33236551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:33236546..33236551, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.69e-18 | 253 |
transitional epithelial cell | 2.18e-10 | 4 |
urothelial cell | 2.18e-10 | 4 |
general ecto-epithelial cell | 2.05e-09 | 14 |
corneal epithelial cell | 1.34e-08 | 2 |
squamous epithelial cell | 8.55e-08 | 63 |
ecto-epithelial cell | 1.05e-07 | 34 |
stratified squamous epithelial cell | 9.69e-07 | 6 |
keratin accumulating cell | 9.69e-07 | 6 |
stratified epithelial cell | 9.69e-07 | 6 |
keratinizing barrier epithelial cell | 9.69e-07 | 6 |
epithelial fate stem cell | 9.69e-07 | 6 |
stratified epithelial stem cell | 9.69e-07 | 6 |
surface ectodermal cell | 9.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.21e-08 | 5 |
transitional epithelium | 4.86e-07 | 6 |
urinary system structure | 9.35e-07 | 47 |