FFCP PHASE1:Hg19::chr1:38201159..38201166,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:38201159..38201166,- | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_at_chr1:38201159..38201166,- | |description=CAGE_peak_at_chr1:38201159..38201166,- | ||
|id=chr1:38201159..38201166,- | |id=chr1:38201159..38201166,- | ||
|ontology_enrichment_celltype=CL:0002602!5.49e-09!2 | |ontology_enrichment_celltype=CL:0002602!5.49e-09!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.39e-66;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!6.16e-28!9;UBERON:0000059!6.14e-23!11;UBERON:0001154!6.47e-17!1;UBERON:0001153!6.47e-17!1;UBERON:0002902!2.25e-16!1;UBERON:0009899!2.25e-16!1;UBERON:0000160!6.34e-14!27;UBERON:0005409!7.80e-11!35;UBERON:0009568!5.49e-09!2;UBERON:0002216!5.49e-09!2;UBERON:0002209!5.49e-09!2;UBERON:0002213!5.49e-09!2;UBERON:0004267!5.49e-09!2;UBERON:0006444!5.49e-09!2;UBERON:0001995!5.49e-09!2;UBERON:0004715!5.49e-09!2;UBERON:0001468!5.49e-09!2;UBERON:0001130!5.49e-09!2;UBERON:0001066!5.49e-09!2 | |ontology_enrichment_uberon=UBERON:0001155!6.16e-28!9;UBERON:0000059!6.14e-23!11;UBERON:0001154!6.47e-17!1;UBERON:0001153!6.47e-17!1;UBERON:0002902!2.25e-16!1;UBERON:0009899!2.25e-16!1;UBERON:0000160!6.34e-14!27;UBERON:0005409!7.80e-11!35;UBERON:0009568!5.49e-09!2;UBERON:0002216!5.49e-09!2;UBERON:0002209!5.49e-09!2;UBERON:0002213!5.49e-09!2;UBERON:0004267!5.49e-09!2;UBERON:0006444!5.49e-09!2;UBERON:0001995!5.49e-09!2;UBERON:0004715!5.49e-09!2;UBERON:0001468!5.49e-09!2;UBERON:0001130!5.49e-09!2;UBERON:0001066!5.49e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.39e-66;1!UBERON:0001153;2.39e-66;1!UBERON:0009854;2.39e-66;1!UBERON:0001155;3.75e-66;9!UBERON:0000059;2.16e-54;11!UBERON:0000160;8.86e-34;17!UBERON:0005409;1.01e-26;22!UBERON:0009856;8.69e-18;4!UBERON:0004921;1.59e-17;33!UBERON:0004907;1.60e-14;5!UBERON:0001555;1.11e-09;54!UBERON:0001007;2.40e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,3.75e-66,9;UBERON:0001154,4.66e-66,1;UBERON:0001153,4.66e-66,1;UBERON:0001045,4.66e-66,1;UBERON:0000059,2.16e-54,11;UBERON:0000160,8.86e-34,17;UBERON:0005409,8.76e-24,25;UBERON:0004907,1.83e-14,5 | |||
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|short_description=p@chr1:38201159..38201166,- | |short_description=p@chr1:38201159..38201166,- | ||
}} | }} |
Latest revision as of 07:54, 28 July 2015
Short description: | p@chr1:38201159..38201166, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:38201159..38201166, - |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 3.75e-66 | 9 |
vermiform appendix | 4.66e-66 | 1 |
caecum | 4.66e-66 | 1 |
midgut | 4.66e-66 | 1 |
large intestine | 2.16e-54 | 11 |
intestine | 8.86e-34 | 17 |
gastrointestinal system | 8.76e-24 | 25 |
lower digestive tract | 1.83e-14 | 5 |