FFCP PHASE1:Hg19::chr1:44018870..44018879,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:44018870..44018879,+ | |||
|description=CAGE_peak_at_chr1:44018870..44018879,+ | |description=CAGE_peak_at_chr1:44018870..44018879,+ | ||
|id=chr1:44018870..44018879,+ | |id=chr1:44018870..44018879,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002097;4.21e-21;2!CL:0000174;1.50e-14;3!CL:0000182;3.84e-14;12!CL:0000077;2.17e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,4.66e-21,2;CL:0000174,1.60e-14,3;CL:0000182,3.84e-14,12;CL:0000077,2.17e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:170;6.13e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,6.34e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001876!4.15e-13!2;UBERON:0007023!1.07e-12!115;UBERON:0002368!1.08e-07!35;UBERON:0001736!1.63e-07!1;UBERON:0006298!1.63e-07!1;UBERON:0002171!1.74e-07!1;UBERON:0006518!1.74e-07!1;UBERON:0008949!1.74e-07!1;UBERON:0000101!1.74e-07!1;UBERON:0002167!1.74e-07!1;UBERON:0002336!5.50e-07!1;UBERON:0001018!5.50e-07!1;UBERON:0002473!5.50e-07!1;UBERON:0005340!5.50e-07!1;UBERON:0002316!5.50e-07!1;UBERON:0003544!5.50e-07!1;UBERON:0001020!5.50e-07!1;UBERON:0005970!5.50e-07!1;UBERON:0002437!5.50e-07!1;UBERON:0002372!5.84e-07!1;UBERON:0001961!5.84e-07!1;UBERON:0001744!5.84e-07!1;UBERON:0001735!5.84e-07!1;UBERON:0002363!6.20e-07!1;UBERON:0007647!6.20e-07!1;UBERON:0010115!6.20e-07!1;UBERON:0002530!7.39e-07!59;UBERON:0002022!7.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.68e-19;19!UBERON:0006925;1.68e-19;19!UBERON:0002368;1.20e-15;33!UBERON:0002423;4.84e-15;25!UBERON:0002369;1.50e-14;3!UBERON:0001235;1.50e-14;3!UBERON:0006858;1.50e-14;3!UBERON:0000949;1.79e-13;43!UBERON:0002365;1.11e-12;31!UBERON:0002330;1.11e-12;31!UBERON:0005172;1.61e-10;52!UBERON:0005173;1.61e-10;52!UBERON:0002530;2.36e-09;57!UBERON:0002417;1.14e-07;58!UBERON:0000916;1.14e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.68e-19,19;UBERON:0006925,1.68e-19,19;UBERON:0008836,1.68e-19,19;UBERON:0002368,9.96e-19,35;UBERON:0008835,5.72e-17,22;UBERON:0003894,5.72e-17,22;UBERON:0009854,2.85e-16,23;UBERON:0007499,4.84e-15,25;UBERON:0009497,4.84e-15,25;UBERON:0000015,4.84e-15,25;UBERON:0002423,4.84e-15,25;UBERON:0006235,4.84e-15,25;UBERON:0004161,4.84e-15,25;UBERON:0000949,9.73e-15,45;UBERON:0002369,1.60e-14,3;UBERON:0001235,1.60e-14,3;UBERON:0006858,1.60e-14,3;UBERON:0009856,1.70e-14,26;UBERON:0005172,2.11e-12,54;UBERON:0005173,2.11e-12,54;UBERON:0002365,2.68e-12,31;UBERON:0002330,2.68e-12,31;UBERON:0002530,2.07e-11,59;UBERON:0002417,3.12e-11,60;UBERON:0000916,3.12e-11,60;UBERON:0003929,2.17e-07,54;UBERON:0005177,6.41e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00218227924896,0,0,0,0,0,3.39681591877069,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.381882949668989,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71553711344522,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00218227924896,0,0,0,0,0,3.39681591877069,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.381882949668989,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:44018870..44018879,+ | |short_description=p@chr1:44018870..44018879,+ | ||
}} | }} |
Latest revision as of 08:28, 28 July 2015
Short description: | p@chr1:44018870..44018879, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:44018870..44018879, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 4.66e-21 | 2 |
steroid hormone secreting cell | 1.60e-14 | 3 |
hepatocyte | 3.84e-14 | 12 |
mesothelial cell | 2.17e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
liver | 1.68e-19 | 19 |
digestive gland | 1.68e-19 | 19 |
liver bud | 1.68e-19 | 19 |
endocrine gland | 9.96e-19 | 35 |
hepatic diverticulum | 5.72e-17 | 22 |
liver primordium | 5.72e-17 | 22 |
digestive tract diverticulum | 2.85e-16 | 23 |
epithelial sac | 4.84e-15 | 25 |
epithelium of foregut-midgut junction | 4.84e-15 | 25 |
anatomical boundary | 4.84e-15 | 25 |
hepatobiliary system | 4.84e-15 | 25 |
foregut-midgut junction | 4.84e-15 | 25 |
septum transversum | 4.84e-15 | 25 |
endocrine system | 9.73e-15 | 45 |
adrenal gland | 1.60e-14 | 3 |
adrenal cortex | 1.60e-14 | 3 |
adrenal/interrenal gland | 1.60e-14 | 3 |
sac | 1.70e-14 | 26 |
abdomen element | 2.11e-12 | 54 |
abdominal segment element | 2.11e-12 | 54 |
exocrine gland | 2.68e-12 | 31 |
exocrine system | 2.68e-12 | 31 |
gland | 2.07e-11 | 59 |
abdominal segment of trunk | 3.12e-11 | 60 |
abdomen | 3.12e-11 | 60 |
gut epithelium | 2.17e-07 | 54 |
trunk region element | 6.41e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 6.34e-08 | 6 |