FFCP PHASE1:Hg19::chr1:44584544..44584557,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=128209 | |EntrezGene=entrezgene:128209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18830 | |HGNC=HGNC:18830 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000476802_5end | |association_with_transcript=2bp_to_ENST00000476802_5end | ||
|cluster_id=chr1:44584544..44584557,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_KLF17_5end | |description=CAGE_peak_4_at_KLF17_5end | ||
Revision as of 08:32, 28 July 2015
| Short description: | p4@KLF17 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_KLF17_5end |
| Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
| Association with transcript: | 2bp_to_ENST00000476802_5end |
| EntrezGene: | 128209 |
| HGNC: | 18830 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@KLF17 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 9.27e-43 | 7 |
| germ cell | 9.27e-43 | 7 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| testis | 1.77e-102 | 8 |
| male reproductive organ | 8.79e-75 | 11 |
| gonad | 1.47e-39 | 21 |
| indifferent external genitalia | 1.47e-39 | 21 |
| indifferent gonad | 1.47e-39 | 21 |
| gonad primordium | 1.47e-39 | 21 |
| external genitalia | 8.52e-38 | 22 |
| male organism | 8.52e-38 | 22 |
| male reproductive system | 8.52e-38 | 22 |
| body cavity | 2.06e-18 | 46 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 3.13e-14 | 22 |
| germ cell cancer | 3.13e-14 | 22 |
Showing 1 to 2 of 2 entries
