FFCP PHASE1:Hg19::chr1:56990054..56990076,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:56990054..56990076,- to FFCP PHASE1:Hg19::chr1:56990054..56990076,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:56990054..56990076,- | |||
|coexpression_cluster_id=C666 | |||
|description=CAGE_peak_at_chr1:56990054..56990076,- | |||
|id=chr1:56990054..56990076,- | |||
|ontology_enrichment_celltype=CL:0000057!8.63e-14!75;CL:0002620!1.19e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.82e-13;3!CL:0000388;1.82e-13;3!CL:0000153;4.85e-11;9!CL:0000447;4.85e-11;9!CL:0000499;3.96e-10;28!CL:0000327;5.45e-09;15!CL:0002617;7.97e-09;2!CL:0000136;2.86e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.88e-13,3;CL:0000388,1.88e-13,3;CL:0000153,2.97e-11,9;CL:0000447,2.97e-11,9;CL:0000499,2.70e-10,28;CL:0000327,3.31e-09,15;CL:0000136,8.05e-09,15;CL:0002617,1.25e-08,2;CL:0000057,7.19e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.39e-15!115;UBERON:0000475!2.62e-09!365;UBERON:0000468!6.59e-09!659;UBERON:0003102!2.54e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.82e-13;3!UBERON:0000043;1.82e-13;3!UBERON:0007845;1.82e-13;3!UBERON:0000341;1.83e-08;2!UBERON:0004905;3.55e-08;8!UBERON:0000982;3.55e-08;8!UBERON:0004770;3.55e-08;8!UBERON:0004457;1.85e-07;9!UBERON:0000042;1.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.88e-13,3;UBERON:0000043,1.88e-13,3;UBERON:0007845,1.88e-13,3;UBERON:0000341,1.84e-08,2;UBERON:0004905,2.23e-08,8;UBERON:0000982,2.23e-08,8;UBERON:0004770,2.23e-08,8 | |||
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| ||
|short_description=p@chr1:56990054..56990076,- | |||
}} | }} |
Latest revision as of 09:19, 28 July 2015
Short description: | p@chr1:56990054..56990076, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:56990054..56990076, - |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.88e-13 | 3 |
tendon cell | 1.88e-13 | 3 |
GAG secreting cell | 2.97e-11 | 9 |
carbohydrate secreting cell | 2.97e-11 | 9 |
stromal cell | 2.70e-10 | 28 |
extracellular matrix secreting cell | 3.31e-09 | 15 |
fat cell | 8.05e-09 | 15 |
adipocyte of breast | 1.25e-08 | 2 |
fibroblast | 7.19e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.88e-13 | 3 |
tendon | 1.88e-13 | 3 |
regular connective tissue | 1.88e-13 | 3 |
throat | 1.84e-08 | 2 |
articulation | 2.23e-08 | 8 |
skeletal joint | 2.23e-08 | 8 |
articular system | 2.23e-08 | 8 |