FFCP PHASE1:Hg19::chr1:61091775..61091779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:61091775..61091779,- | |||
|description=CAGE_peak_at_chr1:61091775..61091779,- | |description=CAGE_peak_at_chr1:61091775..61091779,- | ||
|id=chr1:61091775..61091779,- | |id=chr1:61091775..61091779,- | ||
|ontology_enrichment_celltype=CL:0002178!1.04e-07!3 | |ontology_enrichment_celltype=CL:0002178!1.04e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.54e-15;1!CL:0000164;1.54e-15;1!CL:0000502;1.54e-15;1!CL:0000172;1.54e-15;1!CL:0000173;1.54e-15;1!CL:0000039;4.56e-09;7!CL:0000586;4.56e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.34e-15,1;CL:0000164,1.34e-15,1;CL:0000502,1.34e-15,1;CL:0000172,1.34e-15,1;CL:0000173,1.34e-15,1;CL:0002351,1.34e-15,1;CL:0000039,5.16e-09,7;CL:0000586,5.16e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.55e-16;1!CL:0002351;1.54e-15;1 | |||
|ontology_enrichment_disease=DOID:305!1.49e-19!106;DOID:0050687!6.98e-13!143;DOID:3119!2.02e-09!14;DOID:1749!3.56e-09!14;DOID:162!1.06e-07!235;DOID:14566!2.51e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.54e-15;1!DOID:3095;1.29e-10;22!DOID:2994;1.29e-10;22!DOID:1749;9.80e-10;14!DOID:4074;2.00e-08;2!DOID:4905;2.00e-08;2!DOID:3498;2.00e-08;2!DOID:3905;3.04e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.34e-15,1;DOID:305,2.44e-12,106;DOID:0050687,7.74e-11,143;DOID:3095,1.39e-10,22;DOID:2994,1.39e-10,22;DOID:1749,1.04e-09,14;DOID:4074,2.48e-08,2;DOID:4905,2.48e-08,2;DOID:3498,2.48e-08,2;DOID:3905,2.36e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.65e-20!57;UBERON:0005068!2.65e-20!57;UBERON:0006241!2.65e-20!57;UBERON:0007135!2.65e-20!57;UBERON:0002616!9.43e-18!59;UBERON:0000955!1.86e-16!69;UBERON:0006238!1.86e-16!69;UBERON:0002780!8.55e-16!41;UBERON:0001890!8.55e-16!41;UBERON:0006240!8.55e-16!41;UBERON:0002020!9.09e-16!34;UBERON:0003528!9.09e-16!34;UBERON:0003080!2.66e-15!42;UBERON:0001017!4.96e-15!82;UBERON:0002791!2.88e-14!33;UBERON:0005743!5.51e-14!86;UBERON:0001893!9.86e-14!34;UBERON:0003075!3.19e-13!86;UBERON:0007284!3.19e-13!86;UBERON:0002346!2.62e-12!90;UBERON:0000073!5.80e-12!94;UBERON:0001016!5.80e-12!94;UBERON:0002308!7.20e-12!9;UBERON:0000125!7.20e-12!9;UBERON:0001869!3.75e-11!32;UBERON:0007023!1.22e-09!115;UBERON:0000033!2.32e-09!123;UBERON:0003056!4.93e-09!61;UBERON:0002420!9.40e-09!9;UBERON:0007245!9.40e-09!9;UBERON:0010009!9.40e-09!9;UBERON:0010011!9.40e-09!9;UBERON:0000454!9.40e-09!9;UBERON:0000153!1.41e-08!129;UBERON:0007811!1.41e-08!129;UBERON:0009663!3.86e-08!7;UBERON:0006331!7.72e-08!3;UBERON:0000956!1.19e-07!25;UBERON:0000203!1.19e-07!25;UBERON:0002619!2.21e-07!22;UBERON:0004111!2.45e-07!241;UBERON:0002298!5.24e-07!8;UBERON:0000025!6.21e-07!194 | |ontology_enrichment_uberon=UBERON:0001049!2.65e-20!57;UBERON:0005068!2.65e-20!57;UBERON:0006241!2.65e-20!57;UBERON:0007135!2.65e-20!57;UBERON:0002616!9.43e-18!59;UBERON:0000955!1.86e-16!69;UBERON:0006238!1.86e-16!69;UBERON:0002780!8.55e-16!41;UBERON:0001890!8.55e-16!41;UBERON:0006240!8.55e-16!41;UBERON:0002020!9.09e-16!34;UBERON:0003528!9.09e-16!34;UBERON:0003080!2.66e-15!42;UBERON:0001017!4.96e-15!82;UBERON:0002791!2.88e-14!33;UBERON:0005743!5.51e-14!86;UBERON:0001893!9.86e-14!34;UBERON:0003075!3.19e-13!86;UBERON:0007284!3.19e-13!86;UBERON:0002346!2.62e-12!90;UBERON:0000073!5.80e-12!94;UBERON:0001016!5.80e-12!94;UBERON:0002308!7.20e-12!9;UBERON:0000125!7.20e-12!9;UBERON:0001869!3.75e-11!32;UBERON:0007023!1.22e-09!115;UBERON:0000033!2.32e-09!123;UBERON:0003056!4.93e-09!61;UBERON:0002420!9.40e-09!9;UBERON:0007245!9.40e-09!9;UBERON:0010009!9.40e-09!9;UBERON:0010011!9.40e-09!9;UBERON:0000454!9.40e-09!9;UBERON:0000153!1.41e-08!129;UBERON:0007811!1.41e-08!129;UBERON:0009663!3.86e-08!7;UBERON:0006331!7.72e-08!3;UBERON:0000956!1.19e-07!25;UBERON:0000203!1.19e-07!25;UBERON:0002619!2.21e-07!22;UBERON:0004111!2.45e-07!241;UBERON:0002298!5.24e-07!8;UBERON:0000025!6.21e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001897;2.00e-08;2!UBERON:0010225;2.00e-08;2!UBERON:0000473;4.82e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,1.50e-08,2;UBERON:0010225,1.50e-08,2;UBERON:0000473,5.37e-08,8 | |||
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| ||
|short_description=p@chr1:61091775..61091779,- | |short_description=p@chr1:61091775..61091779,- | ||
}} | }} |
Latest revision as of 09:28, 28 July 2015
Short description: | p@chr1:61091775..61091779, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:61091775..61091779, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.34e-15 | 1 |
enteroendocrine cell | 1.34e-15 | 1 |
type D enteroendocrine cell | 1.34e-15 | 1 |
somatostatin secreting cell | 1.34e-15 | 1 |
pancreatic D cell | 1.34e-15 | 1 |
progenitor cell of endocrine pancreas | 1.34e-15 | 1 |
germ line cell | 5.16e-09 | 7 |
germ cell | 5.16e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 1.50e-08 | 2 |
thalamic complex | 1.50e-08 | 2 |
testis | 5.37e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.34e-15 | 1 |
carcinoma | 2.44e-12 | 106 |
cell type cancer | 7.74e-11 | 143 |
germ cell and embryonal cancer | 1.39e-10 | 22 |
germ cell cancer | 1.39e-10 | 22 |
squamous cell carcinoma | 1.04e-09 | 14 |
pancreas adenocarcinoma | 2.48e-08 | 2 |
pancreatic carcinoma | 2.48e-08 | 2 |
pancreatic ductal adenocarcinoma | 2.48e-08 | 2 |
lung carcinoma | 2.36e-07 | 9 |