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FFCP PHASE1:Hg19::chr1:6523897..6523925,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:6523897..6523925,+
|DHSsupport=supported 
|short_description=p@chr1:6523897..6523925,+
|DPIdataset=robust
|description=CAGE_peak_at_chr1:6523897..6523925,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr1:6523897..6523925,+
|coexpression_cluster_id=C22
|description=CAGE_peak_at_chr1:6523897..6523925,+
|id=chr1:6523897..6523925,+
|ontology_enrichment_celltype=CL:0000624!3.24e-37!6;CL:0000791!2.09e-30!18;CL:0000789!2.09e-30!18;CL:0002420!2.09e-30!18;CL:0002419!2.09e-30!18;CL:0000790!2.09e-30!18;CL:0000623!2.28e-27!3;CL:0000825!2.28e-27!3;CL:0000084!1.26e-21!25;CL:0000827!1.26e-21!25;CL:0000738!2.69e-19!140;CL:0000838!7.89e-19!52;CL:0000542!1.93e-18!53;CL:0000051!1.93e-18!53;CL:0000037!5.43e-17!172;CL:0000566!5.43e-17!172;CL:0002032!6.65e-16!165;CL:0000837!6.65e-16!165;CL:0000988!6.92e-16!182;CL:0002087!6.87e-14!119;CL:0002031!3.23e-13!124;CL:0000898!9.95e-13!3;CL:0000810!2.16e-10!1;CL:0000895!2.16e-10!1;CL:0002436!2.16e-10!1;CL:0002427!2.16e-10!1;CL:0002428!2.16e-10!1;CL:0002429!2.16e-10!1;CL:0002433!2.16e-10!1;CL:0002431!2.16e-10!1;CL:0002432!2.16e-10!1;CL:0000625!1.16e-07!11
|ontology_enrichment_celltype_v019=CL:0000624;1.22e-75;6!CL:0000623;3.86e-38;3!CL:0000895;1.78e-29;1!CL:0000791;9.82e-26;18!CL:0000789;9.82e-26;18!CL:0002419;9.82e-26;18!CL:0000084;1.04e-18;25!CL:0000771;2.37e-15;2!CL:0000542;3.53e-12;53!CL:0000898;8.99e-11;3
|ontology_enrichment_celltype_v019_2=CL:0000624,1.22e-75,6;CL:0000623,3.19e-38,3;CL:0000825,3.19e-38,3;CL:0000810,1.78e-29,1;CL:0000895,1.78e-29,1;CL:0002436,1.78e-29,1;CL:0002427,1.78e-29,1;CL:0002428,1.78e-29,1;CL:0002429,1.78e-29,1;CL:0002433,1.78e-29,1;CL:0002431,1.78e-29,1;CL:0002432,1.78e-29,1;CL:0000791,9.82e-26,18;CL:0000789,9.82e-26,18;CL:0002420,9.82e-26,18;CL:0002419,9.82e-26,18;CL:0000790,9.82e-26,18;CL:0000838,7.57e-20,52;CL:0000542,1.77e-19,53;CL:0000051,1.77e-19,53;CL:0000084,1.04e-18,25;CL:0000827,1.04e-18,25;CL:0000893,1.78e-15,2;CL:0002489,1.78e-15,2;CL:0000809,1.78e-15,2;CL:0000808,1.78e-15,2;CL:0000894,1.78e-15,2;CL:0000806,1.78e-15,2;CL:0000807,1.78e-15,2;CL:0000805,1.78e-15,2;CL:0002425,1.78e-15,2;CL:0000771,2.74e-15,2;CL:0000898,8.99e-11,3;CL:0000738,2.51e-10,136;CL:0002087,4.92e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0002031,1.15e-08,120;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177
|ontology_enrichment_development_v019=CL:0002427;1.78e-29;1!CL:0000790;9.82e-26;18!CL:0002425;1.78e-15;2!CL:0000051;3.53e-12;53
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.11e-08,4;UBERON:0005058,2.11e-08,4;UBERON:0009113,2.11e-08,4;UBERON:0003295,2.11e-08,4;UBERON:0005562,2.11e-08,4
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|short_description=p@chr1:6523897..6523925,+
}}
}}

Latest revision as of 09:45, 28 July 2015

Short description:p@chr1:6523897..6523925, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr1:6523897..6523925, +
Coexpression cluster:C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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