FFCP PHASE1:Hg19::chr1:7447129..7447134,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:7447129..7447134,+ to FFCP PHASE1:Hg19::chr1:7447129..7447134,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:7447129..7447134,+ | |||
|coexpression_cluster_id=C585 | |||
|description=CAGE_peak_at_chr1:7447129..7447134,+ | |||
|id=chr1:7447129..7447134,+ | |||
|ontology_enrichment_celltype=CL:0002166!6.35e-25!3;CL:0002159!2.06e-21!13;CL:0002076!1.33e-19!43;CL:0000066!5.02e-15!254;CL:0000622!2.01e-14!5;CL:0002077!3.50e-14!33;CL:0000223!8.67e-14!59;CL:0000154!4.11e-12!6;CL:0002623!4.66e-11!3;CL:0002231!5.16e-11!3;CL:0000362!3.00e-09!8;CL:0002251!6.42e-09!21;CL:0000220!7.40e-09!246;CL:0000244!7.57e-09!4;CL:0000731!7.57e-09!4;CL:0002321!9.33e-09!248;CL:0002327!1.07e-08!4;CL:0000150!3.06e-08!9;CL:0000221!2.46e-07!71;CL:0000312!5.15e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002166;3.04e-85;3!CL:0002159;5.07e-19;14!CL:0000307;1.09e-10;3!CL:0002368;1.08e-09;13!CL:0000244;2.43e-08;4!CL:0002327;2.43e-08;4!CL:0000731;2.43e-08;4!CL:0002077;5.35e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.04e-85,3;CL:0002159,5.07e-19,14;CL:0000068,9.90e-11,3;CL:0000069,9.90e-11,3;CL:0000307,9.90e-11,3;CL:0000377,9.90e-11,3;CL:0002368,1.04e-09,13;CL:0000244,2.43e-08,4;CL:0000731,2.43e-08,4;CL:0002327,2.61e-08,4;CL:0002077,2.93e-08,34 | |||
|ontology_enrichment_development_v019=CL:0000377;1.09e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!7.54e-19!4;UBERON:0001704!7.54e-19!4;UBERON:0002090!9.46e-13!6;UBERON:0001911!1.07e-08!4;UBERON:0005333!1.07e-08!4;UBERON:0008425!1.07e-08!4;UBERON:0005311!1.07e-08!4;UBERON:0000365!3.06e-07!5;UBERON:0003129!3.66e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.24e-64;4!UBERON:0008895;3.24e-64;4!UBERON:0011159;1.37e-51;5!UBERON:0011137;5.65e-24;11!UBERON:0010323;5.65e-24;11!UBERON:0000075;9.55e-17;16!UBERON:0004765;1.36e-10;26!UBERON:0001911;2.43e-08;4!UBERON:0001434;6.56e-08;36!UBERON:0000365;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.24e-64,4;UBERON:0008895,3.24e-64,4;UBERON:0011159,1.37e-51,5;UBERON:0010188,3.65e-43,6;UBERON:0002539,3.65e-43,6;UBERON:0008816,3.65e-43,6;UBERON:0010323,5.65e-24,11;UBERON:0011137,5.07e-19,14;UBERON:0000075,9.56e-17,16;UBERON:0008814,5.66e-15,18;UBERON:0001911,2.61e-08,4;UBERON:0005333,2.61e-08,4;UBERON:0008425,2.61e-08,4;UBERON:0005311,2.61e-08,4;UBERON:0000365,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,5.20744597416465,9.35715641799751,0,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,4.72167036229961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,1.29151611801369,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,5.20744597416465,9.35715641799751,0,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,4.72167036229961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,1.29151611801369,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:7447129..7447134,+ | |||
}} | }} |
Latest revision as of 10:16, 28 July 2015
Short description: | p@chr1:7447129..7447134, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:7447129..7447134, + |
Coexpression cluster: | C585_Mallassezderived_amniotic_Small_chorionic_nasal_Keratinocyte_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.04e-85 | 3 |
general ecto-epithelial cell | 5.07e-19 | 14 |
duct epithelial cell | 9.90e-11 | 3 |
branched duct epithelial cell | 9.90e-11 | 3 |
tracheal epithelial cell | 9.90e-11 | 3 |
tracheoblast | 9.90e-11 | 3 |
respiratory epithelial cell | 1.04e-09 | 13 |
transitional epithelial cell | 2.43e-08 | 4 |
urothelial cell | 2.43e-08 | 4 |
mammary gland epithelial cell | 2.61e-08 | 4 |
ecto-epithelial cell | 2.93e-08 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.24e-64 | 4 |
splanchnocranium | 3.24e-64 | 4 |
primary subdivision of cranial skeletal system | 1.37e-51 | 5 |
protuberance | 3.65e-43 | 6 |
pharyngeal arch | 3.65e-43 | 6 |
embryonic head | 3.65e-43 | 6 |
cranial skeletal system | 5.65e-24 | 11 |
axial skeletal system | 5.07e-19 | 14 |
subdivision of skeletal system | 9.56e-17 | 16 |
pharyngeal arch system | 5.66e-15 | 18 |
mammary gland | 2.61e-08 | 4 |
mammary bud | 2.61e-08 | 4 |
mammary ridge | 2.61e-08 | 4 |
mammary placode | 2.61e-08 | 4 |
urothelium | 6.39e-07 | 5 |