FFCP PHASE1:Hg19::chr1:8135925..8135929,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:8135925..8135929,- | |||
|coexpression_cluster_id=C195 | |||
|description=CAGE_peak_at_chr1:8135925..8135929,- | |||
|id=chr1:8135925..8135929,- | |||
|ontology_enrichment_celltype=CL:0002368!4.21e-29!13;CL:0002076!3.53e-16!43;CL:0002541!1.73e-15!3;CL:0002202!1.66e-13!9;CL:0002632!1.66e-13!9;CL:0000223!6.58e-13!59;CL:0000066!2.84e-09!254;CL:0000240!1.01e-07!6;CL:0000311!1.01e-07!6;CL:0000079!1.01e-07!6;CL:0000237!1.01e-07!6;CL:0000036!1.01e-07!6;CL:0000357!1.01e-07!6;CL:0000114!1.01e-07!6;CL:0002328!1.48e-07!3;CL:0000349!1.63e-07!3;CL:0002577!1.63e-07!3;CL:0000068!1.98e-07!3;CL:0000069!1.98e-07!3;CL:0000307!1.98e-07!3;CL:0000377!1.98e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.31e-20;13!CL:0002536;2.21e-15;2!CL:0000349;4.23e-14;19!CL:0002202;1.40e-13;9!CL:0002632;1.40e-13;9!CL:0002541;7.78e-11;3!CL:0000307;7.78e-11;3!CL:0002328;1.04e-10;3!CL:0000312;6.21e-07;5!CL:0002537;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.31e-20,13;CL:0002536,2.05e-15,2;CL:0000349,3.96e-14,19;CL:0002202,1.40e-13,9;CL:0002632,1.40e-13,9;CL:0000068,7.42e-11,3;CL:0000069,7.42e-11,3;CL:0000307,7.42e-11,3;CL:0000377,7.42e-11,3;CL:0002541,8.17e-11,3;CL:0002328,1.09e-10,3;CL:0002537,5.70e-07,5;CL:0000312,6.77e-07,5;CL:0002076,8.70e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000377;7.78e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.11e-21!14;UBERON:0000158!2.11e-21!14;UBERON:0003124!1.68e-17!7;UBERON:0000476!1.73e-15!3;UBERON:0000920!1.73e-15!3;UBERON:0000478!6.20e-12!24;UBERON:0007196!1.42e-08!14;UBERON:0001558!1.42e-08!14;UBERON:0004815!1.48e-07!3;UBERON:0002031!1.48e-07!3;UBERON:0005910!2.30e-07!6;UBERON:0000305!6.37e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.86e-26;10!UBERON:0000158;4.86e-26;10!UBERON:0000305;4.73e-17;7!UBERON:0000478;2.56e-11;24!UBERON:0003124;7.78e-11;3!UBERON:0000920;7.78e-11;3!UBERON:0004815;1.04e-10;3!UBERON:0002031;1.04e-10;3!UBERON:0007196;1.53e-08;15!UBERON:0001558;1.53e-08;15!UBERON:0002185;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.89e-19,14;UBERON:0000158,6.89e-19,14;UBERON:0000305,4.02e-17,7;UBERON:0004871,4.07e-15,8;UBERON:0000478,2.43e-11,24;UBERON:0000920,8.17e-11,3;UBERON:0004815,1.09e-10,3;UBERON:0002031,1.09e-10,3;UBERON:0007196,1.53e-08,15;UBERON:0001558,1.53e-08,15;UBERON:0002185,6.39e-07,5 | |||
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|short_description=p@chr1:8135925..8135929,- | |||
}} | }} |
Latest revision as of 10:35, 28 July 2015
Short description: | p@chr1:8135925..8135929, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:8135925..8135929, - |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.31e-20 | 13 |
amniotic epithelial cell | 2.05e-15 | 2 |
extraembryonic cell | 3.96e-14 | 19 |
epithelial cell of tracheobronchial tree | 1.40e-13 | 9 |
epithelial cell of lower respiratory tract | 1.40e-13 | 9 |
duct epithelial cell | 7.42e-11 | 3 |
branched duct epithelial cell | 7.42e-11 | 3 |
tracheal epithelial cell | 7.42e-11 | 3 |
tracheoblast | 7.42e-11 | 3 |
chorionic membrane mesenchymal stem cell | 8.17e-11 | 3 |
bronchial epithelial cell | 1.09e-10 | 3 |
amnion mesenchymal stem cell | 5.70e-07 | 5 |
keratinocyte | 6.77e-07 | 5 |
endo-epithelial cell | 8.70e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.89e-19 | 14 |
membranous layer | 6.89e-19 | 14 |
amnion | 4.02e-17 | 7 |
somatic layer of lateral plate mesoderm | 4.07e-15 | 8 |
extraembryonic structure | 2.43e-11 | 24 |
egg chorion | 8.17e-11 | 3 |
lower respiratory tract epithelium | 1.09e-10 | 3 |
epithelium of bronchus | 1.09e-10 | 3 |
tracheobronchial tree | 1.53e-08 | 15 |
lower respiratory tract | 1.53e-08 | 15 |
bronchus | 6.39e-07 | 5 |