FFCP PHASE1:Hg19::chr1:9304987..9305015,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_CU687354_5end | |association_with_transcript=0bp_to_CU687354_5end | ||
|cluster_id=chr1:9304987..9305015,+ | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_1_at_CU687354_5end | |description=CAGE_peak_1_at_CU687354_5end | ||
|id=chr1:9304987..9305015,+ | |id=chr1:9304987..9305015,+ | ||
|ontology_enrichment_celltype=CL:0000990!3.67e-09!8;CL:0000451!3.58e-07!10 | |ontology_enrichment_celltype=CL:0000990!3.67e-09!8;CL:0000451!3.58e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.86e-07;4!CL:0000731;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.69e-07,4;CL:0000731,1.69e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.16e-26;1!UBERON:0006298;3.58e-26;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!1.19e-08!35;UBERON:0000166!8.51e-08!21;UBERON:0001044!4.93e-07!6;UBERON:0003293!4.93e-07!6;UBERON:0003294!4.93e-07!6;UBERON:0010047!4.93e-07!6;UBERON:0000167!4.93e-07!6;UBERON:0004119!5.93e-07!169;UBERON:0000925!5.93e-07!169;UBERON:0006595!5.93e-07!169;UBERON:0000165!7.27e-07!28;UBERON:0000930!7.27e-07!28 | |ontology_enrichment_uberon=UBERON:0000161!1.19e-08!35;UBERON:0000166!8.51e-08!21;UBERON:0001044!4.93e-07!6;UBERON:0003293!4.93e-07!6;UBERON:0003294!4.93e-07!6;UBERON:0010047!4.93e-07!6;UBERON:0000167!4.93e-07!6;UBERON:0004119!5.93e-07!169;UBERON:0000925!5.93e-07!169;UBERON:0006595!5.93e-07!169;UBERON:0000165!7.27e-07!28;UBERON:0000930!7.27e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.14e-50;2!UBERON:0003127;5.83e-50;2!UBERON:0001044;4.90e-38;6!UBERON:0003293;4.90e-38;6!UBERON:0003294;4.90e-38;6!UBERON:0010047;4.90e-38;6!UBERON:0003408;4.90e-38;6!UBERON:0000167;4.90e-38;6!UBERON:0001831;2.16e-26;1!UBERON:0001567;2.16e-26;1!UBERON:0001736;3.58e-26;1!UBERON:0001041;8.70e-17;14!UBERON:0003126;4.22e-15;7!UBERON:0001005;4.22e-15;7!UBERON:0004089;6.43e-14;2!UBERON:0000341;1.29e-13;2!UBERON:0000161;1.45e-12;19!UBERON:0000166;1.45e-12;19!UBERON:0000165;9.72e-09;28!UBERON:0002365;8.43e-08;31!UBERON:0002330;8.43e-08;31!UBERON:0007196;1.47e-07;15!UBERON:0001558;1.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.14e-50,2;UBERON:0003127,8.50e-50,2;UBERON:0001044,4.90e-38,6;UBERON:0003293,4.90e-38,6;UBERON:0003294,4.90e-38,6;UBERON:0010047,4.90e-38,6;UBERON:0000167,4.90e-38,6;UBERON:0001831,2.16e-26,1;UBERON:0001567,2.16e-26,1;UBERON:0008801,2.16e-26,1;UBERON:0001736,3.58e-26,1;UBERON:0006298,3.58e-26,1;UBERON:0003408,3.52e-23,10;UBERON:0003126,4.69e-15,7;UBERON:0001005,4.69e-15,7;UBERON:0004089,6.43e-14,2;UBERON:0000341,1.21e-13,2;UBERON:0000166,6.05e-11,22;UBERON:0001004,1.20e-08,74;UBERON:0000165,1.85e-08,29;UBERON:0000930,1.85e-08,29;UBERON:0002365,5.94e-08,31;UBERON:0002330,5.94e-08,31;UBERON:0007196,1.54e-07,15;UBERON:0001558,1.54e-07,15;UBERON:0001041,2.23e-07,87;UBERON:0000161,6.26e-07,36;UBERON:0000153,7.40e-07,62;UBERON:0007811,7.40e-07,62 | |||
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| ||
|short_description=p1@CU687354 | |short_description=p1@CU687354 | ||
}} | }} |
Latest revision as of 11:21, 28 July 2015
Short description: | p1@CU687354 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU687354_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_CU687354_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.69e-07 | 4 |
urothelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.14e-50 | 2 |
open tracheal system trachea | 8.50e-50 | 2 |
saliva-secreting gland | 4.90e-38 | 6 |
gland of oral region | 4.90e-38 | 6 |
gland of foregut | 4.90e-38 | 6 |
oral gland | 4.90e-38 | 6 |
oral cavity | 4.90e-38 | 6 |
parotid gland | 2.16e-26 | 1 |
cheek | 2.16e-26 | 1 |
parotid gland primordium | 2.16e-26 | 1 |
submandibular gland | 3.58e-26 | 1 |
submandibular gland primordium | 3.58e-26 | 1 |
gland of gut | 3.52e-23 | 10 |
trachea | 4.69e-15 | 7 |
respiratory airway | 4.69e-15 | 7 |
midface | 6.43e-14 | 2 |
throat | 1.21e-13 | 2 |
oral opening | 6.05e-11 | 22 |
respiratory system | 1.20e-08 | 74 |
mouth | 1.85e-08 | 29 |
stomodeum | 1.85e-08 | 29 |
exocrine gland | 5.94e-08 | 31 |
exocrine system | 5.94e-08 | 31 |
tracheobronchial tree | 1.54e-07 | 15 |
lower respiratory tract | 1.54e-07 | 15 |
foregut | 2.23e-07 | 87 |
orifice | 6.26e-07 | 36 |
anterior region of body | 7.40e-07 | 62 |
craniocervical region | 7.40e-07 | 62 |