FFCP PHASE1:Hg19::chr20:21143580..21143595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:21143580..21143595,+ | |||
|coexpression_cluster_id=C1670 | |coexpression_cluster_id=C1670 | ||
|description=CAGE_peak_at_chr20:21143580..21143595,+ | |description=CAGE_peak_at_chr20:21143580..21143595,+ | ||
Latest revision as of 12:22, 28 July 2015
| Short description: | p@chr20:21143580..21143595, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr20:21143580..21143595, + |
| Coexpression cluster: | C1670_Urothelial_Mallassezderived_squamous_Gingival_Mammary_oral_Keratinocyte |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr20:21143580..21143595+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelial cell | 4.63e-27 | 42 |
| general ecto-epithelial cell | 1.54e-25 | 14 |
| epithelial cell of Malassez | 4.97e-24 | 3 |
| gingival epithelial cell | 3.33e-23 | 3 |
| stratified squamous epithelial cell | 1.11e-19 | 6 |
| keratin accumulating cell | 1.11e-19 | 6 |
| stratified epithelial cell | 1.11e-19 | 6 |
| keratinizing barrier epithelial cell | 1.11e-19 | 6 |
| epithelial fate stem cell | 1.11e-19 | 6 |
| stratified epithelial stem cell | 1.11e-19 | 6 |
Showing 1 to 10 of 31 entries
| Ontology term | p-value | n |
|---|---|---|
| gingival epithelium | 3.33e-23 | 3 |
| mouth mucosa | 3.03e-20 | 13 |
| jaw skeleton | 3.55e-18 | 4 |
| splanchnocranium | 3.55e-18 | 4 |
| surface structure | 3.39e-16 | 99 |
| primary subdivision of cranial skeletal system | 1.18e-14 | 5 |
| urothelium | 2.92e-14 | 5 |
| mucosa | 5.35e-13 | 20 |
| protuberance | 2.68e-12 | 6 |
| pharyngeal arch | 2.68e-12 | 6 |
Showing 1 to 10 of 35 entries
