FFCP PHASE1:Hg19::chr20:23367317..23367336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:23367317..23367336,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_at_chr20:23367317..23367336,- | |description=CAGE_peak_at_chr20:23367317..23367336,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.66e-23;3!CL:0000622;1.71e-14;5!CL:0000154;2.59e-12;6!CL:0000150;1.16e-08;9 | |ontology_enrichment_celltype_v019=CL:0002623;3.66e-23;3!CL:0000622;1.71e-14;5!CL:0000154;2.59e-12;6!CL:0000150;1.16e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.27e-23,3;CL:0000622,1.60e-14,5;CL:0000154,2.45e-12,6;CL:0000150,1.12e-08,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!3.01e-12!3;UBERON:0004854!3.01e-12!3;UBERON:0009034!3.01e-12!3;UBERON:0002095!3.01e-12!3;UBERON:0004782!3.01e-12!3;UBERON:0003281!3.01e-12!3;UBERON:0009664!3.01e-12!3;UBERON:0002296!3.01e-12!3;UBERON:0005602!3.01e-12!3;UBERON:0001179!3.01e-12!3;UBERON:0006293!3.01e-12!3;UBERON:0001874!1.25e-09!1 | |ontology_enrichment_uberon=UBERON:0002106!3.01e-12!3;UBERON:0004854!3.01e-12!3;UBERON:0009034!3.01e-12!3;UBERON:0002095!3.01e-12!3;UBERON:0004782!3.01e-12!3;UBERON:0003281!3.01e-12!3;UBERON:0009664!3.01e-12!3;UBERON:0002296!3.01e-12!3;UBERON:0005602!3.01e-12!3;UBERON:0001179!3.01e-12!3;UBERON:0006293!3.01e-12!3;UBERON:0001874!1.25e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.59e-17;33!UBERON:0000160;8.72e-16;17!UBERON:0002108;1.40e-14;4!UBERON:0005409;1.29e-12;22!UBERON:0001044;2.59e-12;6!UBERON:0003293;2.59e-12;6!UBERON:0003294;2.59e-12;6!UBERON:0010047;2.59e-12;6!UBERON:0003408;2.59e-12;6!UBERON:0000167;2.59e-12;6!UBERON:0001555;1.90e-11;54!UBERON:0001155;1.16e-08;9!UBERON:0000059;2.55e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.59e-17;33!UBERON:0000160;8.72e-16;17!UBERON:0002108;1.40e-14;4!UBERON:0005409;1.29e-12;22!UBERON:0001044;2.59e-12;6!UBERON:0003293;2.59e-12;6!UBERON:0003294;2.59e-12;6!UBERON:0010047;2.59e-12;6!UBERON:0003408;2.59e-12;6!UBERON:0000167;2.59e-12;6!UBERON:0001555;1.90e-11;54!UBERON:0001155;1.16e-08;9!UBERON:0000059;2.55e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.05e-16,17;UBERON:0002108,1.40e-14,4;UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0005409,2.77e-11,25;UBERON:0001155,1.21e-08,9;UBERON:0003408,6.13e-08,10;UBERON:0000059,2.63e-07,11 | |||
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|short_description=p@chr20:23367317..23367336,- | |short_description=p@chr20:23367317..23367336,- | ||
}} | }} |
Latest revision as of 12:33, 28 July 2015
Short description: | p@chr20:23367317..23367336, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:23367317..23367336, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.27e-23 | 3 |
acinar cell | 1.60e-14 | 5 |
protein secreting cell | 2.45e-12 | 6 |
glandular epithelial cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.05e-16 | 17 |
small intestine | 1.40e-14 | 4 |
saliva-secreting gland | 2.45e-12 | 6 |
gland of oral region | 2.45e-12 | 6 |
gland of foregut | 2.45e-12 | 6 |
oral gland | 2.45e-12 | 6 |
oral cavity | 2.45e-12 | 6 |
gastrointestinal system | 2.77e-11 | 25 |
colon | 1.21e-08 | 9 |
gland of gut | 6.13e-08 | 10 |
large intestine | 2.63e-07 | 11 |