FFCP PHASE1:Hg19::chr20:23728429..23728453,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:23728429..23728453,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_at_chr20:23728429..23728453,- | |description=CAGE_peak_at_chr20:23728429..23728453,- | ||
|id=chr20:23728429..23728453,- | |id=chr20:23728429..23728453,- | ||
|ontology_enrichment_celltype=CL:0002322!5.00e-14!5;CL:0002622!7.30e-11!3;CL:0002563!2.23e-08!4 | |ontology_enrichment_celltype=CL:0002322!5.00e-14!5;CL:0002622!7.30e-11!3;CL:0002563!2.23e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002231;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.83e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;9.91e-41;1!UBERON:0006242;2.21e-40;1!UBERON:0004161;2.33e-15;11!UBERON:0009497;3.64e-13;13!UBERON:0006595;3.63e-07;86 | |||
|ontology_enrichment_disease=DOID:0060060!1.53e-08!1;DOID:0060061!1.53e-08!1;DOID:8691!1.53e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!2.17e-16!2;UBERON:0000161!7.82e-16!35;UBERON:0001046!1.64e-13!19;UBERON:0001044!3.24e-12!6;UBERON:0003293!3.24e-12!6;UBERON:0003294!3.24e-12!6;UBERON:0010047!3.24e-12!6;UBERON:0000167!3.24e-12!6;UBERON:0002367!5.01e-11!11;UBERON:0010147!5.01e-11!11;UBERON:0009846!5.01e-11!11;UBERON:0003353!5.01e-11!11;UBERON:0004902!5.01e-11!11;UBERON:0003820!5.01e-11!11;UBERON:0009847!5.01e-11!11;UBERON:0003937!4.04e-10!12;UBERON:0005399!4.04e-10!12;UBERON:0001736!3.31e-09!1;UBERON:0006298!3.31e-09!1;UBERON:0001831!6.65e-09!1;UBERON:0001567!6.65e-09!1;UBERON:0008801!6.65e-09!1;UBERON:0000166!9.72e-09!21;UBERON:0000162!1.08e-08!14;UBERON:0001353!1.08e-08!14;UBERON:0000163!1.08e-08!14;UBERON:0006866!1.08e-08!14;UBERON:0000164!1.08e-08!14;UBERON:0000931!1.08e-08!14;UBERON:0001154!1.32e-08!1;UBERON:0001153!1.32e-08!1;UBERON:0002372!2.22e-08!1;UBERON:0001961!2.22e-08!1;UBERON:0001744!2.22e-08!1;UBERON:0001735!2.22e-08!1;UBERON:0001242!2.23e-08!4;UBERON:0001262!2.23e-08!4;UBERON:0004786!2.23e-08!4;UBERON:0004808!2.23e-08!4;UBERON:0001277!2.23e-08!4;UBERON:0004122!4.02e-08!15;UBERON:0003929!8.45e-08!54;UBERON:0003408!1.63e-07!10;UBERON:0002530!4.08e-07!59;UBERON:0000078!6.70e-07!18;UBERON:0003350!7.26e-07!5;UBERON:0001007!9.16e-07!155;UBERON:0001555!9.16e-07!155;UBERON:0007026!9.16e-07!155;UBERON:0004907!9.73e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;9.91e-41;1!UBERON:0001044;1.82e-27;6!UBERON:0003293;1.82e-27;6!UBERON:0003294;1.82e-27;6!UBERON:0010047;1.82e-27;6!UBERON:0003408;1.82e-27;6!UBERON:0000167;1.82e-27;6!UBERON:0001829;3.81e-21;2!UBERON:0002110;1.83e-14;3!UBERON:0001041;2.00e-12;14!UBERON:0002365;4.36e-12;31!UBERON:0002330;4.36e-12;31!UBERON:0000161;1.99e-09;19!UBERON:0000166;1.99e-09;19!UBERON:0002530;4.32e-08;57!UBERON:0002423;2.50e-07;25!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,9.91e-41,1;UBERON:0006298,9.91e-41,1;UBERON:0001044,1.82e-27,6;UBERON:0003293,1.82e-27,6;UBERON:0003294,1.82e-27,6;UBERON:0010047,1.82e-27,6;UBERON:0000167,1.82e-27,6;UBERON:0001829,3.81e-21,2;UBERON:0003408,5.90e-17,10;UBERON:0002110,1.60e-14,3;UBERON:0006242,1.60e-14,3;UBERON:0002365,2.48e-12,31;UBERON:0002330,2.48e-12,31;UBERON:0002530,2.01e-11,59;UBERON:0000161,9.52e-11,36;UBERON:0000166,2.82e-08,22;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0003929,2.27e-07,54;UBERON:0009497,2.50e-07,25;UBERON:0000015,2.50e-07,25;UBERON:0002423,2.50e-07,25;UBERON:0006235,2.50e-07,25;UBERON:0004161,2.50e-07,25;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.813357600086629,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,1.32945394550784,0,0,0,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,123.90547934024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.891933943872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.813357600086629,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,1.32945394550784,0,0,0,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,123.90547934024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.891933943872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:23728429..23728453,- | |short_description=p@chr20:23728429..23728453,- | ||
}} | }} |
Latest revision as of 12:35, 28 July 2015
Short description: | p@chr20:23728429..23728453, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:23728429..23728453, - |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 9.91e-41 | 1 |
submandibular gland primordium | 9.91e-41 | 1 |
saliva-secreting gland | 1.82e-27 | 6 |
gland of oral region | 1.82e-27 | 6 |
gland of foregut | 1.82e-27 | 6 |
oral gland | 1.82e-27 | 6 |
oral cavity | 1.82e-27 | 6 |
major salivary gland | 3.81e-21 | 2 |
gland of gut | 5.90e-17 | 10 |
gallbladder | 1.60e-14 | 3 |
gall bladder primordium | 1.60e-14 | 3 |
exocrine gland | 2.48e-12 | 31 |
exocrine system | 2.48e-12 | 31 |
gland | 2.01e-11 | 59 |
orifice | 9.52e-11 | 36 |
oral opening | 2.82e-08 | 22 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
gut epithelium | 2.27e-07 | 54 |
epithelium of foregut-midgut junction | 2.50e-07 | 25 |
anatomical boundary | 2.50e-07 | 25 |
hepatobiliary system | 2.50e-07 | 25 |
foregut-midgut junction | 2.50e-07 | 25 |
septum transversum | 2.50e-07 | 25 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |