FFCP PHASE1:Hg19::chr20:30277227..30277231,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:30277227..30277231,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_at_chr20:30277227..30277231,- | |description=CAGE_peak_at_chr20:30277227..30277231,- |
Latest revision as of 12:50, 28 July 2015
Short description: | p@chr20:30277227..30277231, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30277227..30277231, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr20:30277227..30277231- |
---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.77e-08 | 3 |
serous secreting cell | 7.77e-07 | 1 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
valve | 3.89e-16 | 3 |
cardiac mesenchyme | 3.89e-16 | 3 |
cardial valve | 3.89e-16 | 3 |
tunica intima | 3.89e-16 | 3 |
heart layer | 3.89e-16 | 3 |
endocardium | 3.89e-16 | 3 |
endocardial cushion | 3.89e-16 | 3 |
presumptive endocardium | 3.89e-16 | 3 |
bronchoalveolar duct junction | 2.97e-11 | 2 |
alveolar duct | 2.97e-11 | 2 |
Showing 1 to 10 of 24 entries
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.97e-11 | 2 |
non-small cell lung carcinoma | 4.81e-10 | 5 |
respiratory system cancer | 7.74e-08 | 16 |
ovary epithelial cancer | 7.77e-07 | 1 |
Showing 1 to 4 of 4 entries