FFCP PHASE1:Hg19::chr20:30307595..30307606,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:30307595..30307606,-
|short_description=p@chr20:30307595..30307606,-
|description=CAGE_peak_at_chr20:30307595..30307606,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:30307595..30307606,- | |||
|description=CAGE_peak_at_chr20:30307595..30307606,- | |||
|id=chr20:30307595..30307606,- | |||
|ontology_enrichment_celltype=CL:0000066!5.99e-16!254;CL:1000507!1.19e-09!12;CL:1000494!1.19e-09!12;CL:1000497!3.59e-07!18;CL:0002518!3.59e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.46e-07;10!CL:1000494;4.46e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.01e-07,10;CL:1000494,4.01e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.47e-17;1 | |||
|ontology_enrichment_disease=DOID:305!1.80e-23!106;DOID:0050687!8.26e-17!143;DOID:299!1.51e-12!25;DOID:162!7.02e-11!235;DOID:14566!2.66e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.48e-31;2!DOID:0050619;6.47e-17;1!DOID:1357;6.47e-17;1!DOID:3111;1.78e-16;1!DOID:3603;1.78e-16;1!DOID:299;4.57e-10;25!DOID:3910;6.67e-09;2!DOID:4468;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.87e-31,2;DOID:0050619,8.86e-17,1;DOID:1357,8.86e-17,1;DOID:3111,1.04e-16,1;DOID:3603,1.04e-16,1;DOID:299,4.52e-10,25;DOID:3910,5.94e-09,2;DOID:4468,7.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.19e-09!12;UBERON:0001231!1.19e-09!12;UBERON:0004810!1.19e-09!12;UBERON:0000466!2.72e-09!126;UBERON:0003104!5.95e-09!238;UBERON:0009142!5.95e-09!238;UBERON:0000058!7.10e-09!26;UBERON:0005177!1.05e-08!107;UBERON:0005911!1.22e-08!82;UBERON:0001007!4.51e-08!155;UBERON:0001555!4.51e-08!155;UBERON:0007026!4.51e-08!155;UBERON:0000077!6.96e-08!130;UBERON:0002100!8.42e-08!216;UBERON:0004921!9.21e-08!129;UBERON:0004185!9.21e-08!129;UBERON:0004119!1.33e-07!169;UBERON:0000925!1.33e-07!169;UBERON:0006595!1.33e-07!169;UBERON:0000464!2.40e-07!104;UBERON:0001041!3.22e-07!98;UBERON:0009569!3.69e-07!113;UBERON:0003929!6.58e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;6.47e-17;1!UBERON:0001825;6.47e-17;1!UBERON:0002294;7.31e-10;7!UBERON:0001173;7.31e-10;7!UBERON:0004903;6.67e-09;2!UBERON:0002173;6.67e-09;2!UBERON:0002186;6.67e-09;2!UBERON:0000058;4.46e-07;10!UBERON:0004211;4.46e-07;10!UBERON:0009773;4.46e-07;10!UBERON:0001231;4.46e-07;10!UBERON:0004810;4.46e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.86e-17,1;UBERON:0001825,8.86e-17,1;UBERON:0004903,5.94e-09,2;UBERON:0002173,5.94e-09,2;UBERON:0002186,5.94e-09,2;UBERON:0002294,6.77e-08,9;UBERON:0001173,6.77e-08,9;UBERON:0004912,6.77e-08,9;UBERON:0004810,4.01e-07,10 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.483437798366489,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,2.35304930753057,1.46139224653261,0.316654886678627,0,0,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,0.316379424718726,0,0.767693373934002,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0.597743964753209,0,0,0,0,0,2.15684042753584,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0.278847488557207,0,0.341826167541004,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0.706765357169704,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.569219092059585,0.138674673013139,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,2.98834192635094,0.19980960958213,0.288180834308212,0,0,0.432164393964449,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0.659326867049332,0.741438982396034,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.0524545881349981,0.211200673038813,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,0,0.533937062838473,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,2.04170325125305,0,0,0,0,0,0.0620964029413835,0,0.499921631848426,0,0,0.235265819698172,0.936669811613763,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,1.69049698686902,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0,0.49131575253029,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0.667388411352415,0,0,0,0,0.431855182437243,0,0.0714765441766563,0.158013611732727,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0.223710863595585,1.27595303699816,2.07260472469858,0,0,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.357107877211315,1.41157948686277,0.802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,1.12131862580613,0.0636471582781649,0,0,0,0,0.143444410785353,0,0.407016343054873,0,0,0.628776414746108,0,0,0,0,0,0 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|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.483437798366489,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,2.35304930753057,1.46139224653261,0.316654886678627,0,0,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,0.316379424718726,0,0.767693373934002,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0.597743964753209,0,0,0,0,0,2.15684042753584,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0.278847488557207,0,0.341826167541004,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0.706765357169704,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.569219092059585,0.138674673013139,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,2.98834192635094,0.19980960958213,0.288180834308212,0,0,0.432164393964449,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0.659326867049332,0.741438982396034,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.0524545881349981,0.211200673038813,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,0,0.533937062838473,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,2.04170325125305,0,0,0,0,0,0.0620964029413835,0,0.499921631848426,0,0,0.235265819698172,0.936669811613763,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,1.69049698686902,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0,0.49131575253029,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0.667388411352415,0,0,0,0,0.431855182437243,0,0.0714765441766563,0.158013611732727,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0.223710863595585,1.27595303699816,2.07260472469858,0,0,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.357107877211315,1.41157948686277,0.802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,1.12131862580613,0.0636471582781649,0,0,0,0,0.143444410785353,0,0.407016343054873,0,0,0.628776414746108,0,0,0,0,0,0 | ||
|short_description=p@chr20:30307595..30307606,- | |||
}} | }} |
Latest revision as of 12:50, 28 July 2015
Short description: | p@chr20:30307595..30307606, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30307595..30307606, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.01e-07 | 10 |
nephron tubule epithelial cell | 4.01e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.86e-17 | 1 |
paranasal sinus | 8.86e-17 | 1 |
bronchoalveolar duct junction | 5.94e-09 | 2 |
alveolar duct | 5.94e-09 | 2 |
bronchiole | 5.94e-09 | 2 |
biliary system | 6.77e-08 | 9 |
biliary tree | 6.77e-08 | 9 |
biliary bud | 6.77e-08 | 9 |
nephron tubule epithelium | 4.01e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.87e-31 | 2 |
paranasal sinus cancer | 8.86e-17 | 1 |
maxillary sinus cancer | 8.86e-17 | 1 |
cystadenocarcinoma | 1.04e-16 | 1 |
mucinous cystadenocarcinoma | 1.04e-16 | 1 |
adenocarcinoma | 4.52e-10 | 25 |
lung adenocarcinoma | 5.94e-09 | 2 |
clear cell adenocarcinoma | 7.49e-09 | 2 |