FFCP PHASE1:Hg19::chr20:33412436..33412439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:33412436..33412439,+ | |||
|description=CAGE_peak_at_chr20:33412436..33412439,+ | |description=CAGE_peak_at_chr20:33412436..33412439,+ | ||
|id=chr20:33412436..33412439,+ | |id=chr20:33412436..33412439,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.86e-08,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.08e-16!235;DOID:305!3.23e-16!106;DOID:14566!6.82e-16!239;DOID:0050687!3.67e-15!143;DOID:299!3.18e-07!25;DOID:7!7.54e-07!39 | |ontology_enrichment_disease=DOID:162!2.08e-16!235;DOID:305!3.23e-16!106;DOID:14566!6.82e-16!239;DOID:0050687!3.67e-15!143;DOID:299!3.18e-07!25;DOID:7!7.54e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.05e-17;14!DOID:299;4.66e-12;25 | |ontology_enrichment_disease_v019=DOID:1749;1.05e-17;14!DOID:299;4.66e-12;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,5.05e-19,106;DOID:1749,7.73e-18,14;DOID:162,1.35e-13,235;DOID:14566,3.49e-13,239;DOID:0050687,7.79e-13,143;DOID:299,2.60e-12,25;DOID:0050686,2.13e-09,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,8.67e-07,1;UBERON:0005056,8.67e-07,1;UBERON:0004913,9.67e-07,1;UBERON:0003703,9.67e-07,1;UBERON:0001174,9.67e-07,1;UBERON:0004914,9.67e-07,1 | |||
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| ||
|short_description=p@chr20:33412436..33412439,+ | |short_description=p@chr20:33412436..33412439,+ | ||
}} | }} |
Latest revision as of 13:17, 28 July 2015
Short description: | p@chr20:33412436..33412439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33412436..33412439, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.86e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 8.67e-07 | 1 |
external female genitalia | 8.67e-07 | 1 |
hepatopancreatic ampulla | 9.67e-07 | 1 |
extrahepatic bile duct | 9.67e-07 | 1 |
common bile duct | 9.67e-07 | 1 |
duodenal papilla | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.05e-19 | 106 |
squamous cell carcinoma | 7.73e-18 | 14 |
cancer | 1.35e-13 | 235 |
disease of cellular proliferation | 3.49e-13 | 239 |
cell type cancer | 7.79e-13 | 143 |
adenocarcinoma | 2.60e-12 | 25 |
organ system cancer | 2.13e-09 | 137 |