FFCP PHASE1:Hg19::chr20:48207482..48207483,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48207482..48207483,- | |||
|description=CAGE_peak_at_chr20:48207482..48207483,- | |description=CAGE_peak_at_chr20:48207482..48207483,- | ||
|id=chr20:48207482..48207483,- | |id=chr20:48207482..48207483,- | ||
|ontology_enrichment_celltype=CL:0002334!1.11e-07!12;CL:0000077!4.00e-07!19 | |ontology_enrichment_celltype=CL:0002334!1.11e-07!12;CL:0000077!4.00e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002581;2.46e-13;1!CL:0002616;2.46e-13;1!CL:0000511;5.70e-13;1!CL:0002625;5.70e-13;1!CL:0000216;5.70e-13;1!CL:1000306;8.16e-13;4!CL:0002547;8.16e-13;4!CL:0000077;4.85e-10;19!CL:0002097;4.04e-07;2 | |ontology_enrichment_celltype_v019=CL:0002581;2.46e-13;1!CL:0002616;2.46e-13;1!CL:0000511;5.70e-13;1!CL:0002625;5.70e-13;1!CL:0000216;5.70e-13;1!CL:1000306;8.16e-13;4!CL:0002547;8.16e-13;4!CL:0000077;4.85e-10;19!CL:0002097;4.04e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,2.32e-13,1;CL:0002616,2.62e-13,1;CL:0000511,3.76e-13,1;CL:0002625,3.76e-13,1;CL:0000216,3.76e-13,1;CL:1000306,6.07e-13,4;CL:0002547,6.07e-13,4;CL:0000077,5.09e-10,19;CL:0002097,4.98e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;7.08e-25;2!UBERON:0001136;5.70e-13;1!UBERON:0001343;5.70e-13;1!UBERON:0004910;5.70e-13;1!UBERON:0004813;5.70e-13;1!UBERON:0004797;8.16e-13;4!UBERON:0000415;8.16e-13;4!UBERON:0007240;8.16e-13;4!UBERON:0005742;8.16e-13;4!UBERON:0005734;8.16e-13;4!UBERON:0004664;8.16e-13;4!UBERON:0004663;8.16e-13;4!UBERON:0001013;3.38e-08;14!UBERON:0004909;4.04e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0005406;7.08e-25;2!UBERON:0001136;5.70e-13;1!UBERON:0001343;5.70e-13;1!UBERON:0004910;5.70e-13;1!UBERON:0004813;5.70e-13;1!UBERON:0004797;8.16e-13;4!UBERON:0000415;8.16e-13;4!UBERON:0007240;8.16e-13;4!UBERON:0005742;8.16e-13;4!UBERON:0005734;8.16e-13;4!UBERON:0004664;8.16e-13;4!UBERON:0004663;8.16e-13;4!UBERON:0001013;3.38e-08;14!UBERON:0004909;4.04e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,7.09e-25,2;UBERON:0001136,3.76e-13,1;UBERON:0001343,3.76e-13,1;UBERON:0004910,3.76e-13,1;UBERON:0005154,3.76e-13,1;UBERON:0005295,3.76e-13,1;UBERON:0004813,3.76e-13,1;UBERON:0005297,3.76e-13,1;UBERON:0005294,3.76e-13,1;UBERON:0010141,3.76e-13,1;UBERON:0005891,3.76e-13,1;UBERON:0000415,6.07e-13,4;UBERON:0007240,6.07e-13,4;UBERON:0005742,6.07e-13,4;UBERON:0005734,6.07e-13,4;UBERON:0004664,6.07e-13,4;UBERON:0004663,6.07e-13,4;UBERON:0001013,3.59e-08,14;UBERON:0004797,8.94e-08,7;UBERON:0004909,3.28e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,1.00269411196656,0,0,0,1.0247305578054,3.25148368899696,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04541115870403,1.72101972449288,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0.635795703478686,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.20575750823834,0,0.699810938274399,0,0,0,0.239624855491583,0,0,0,0,0,0.336255431980582,0,0,0.128343036279748,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.640695746278505,1.53512174720011,0.64341568457443,2.96836132889982,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,0.309123034943167,0,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.94443704049192,0,0.616067160352178,0,0,0,0.572499546967965,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0.404364963146632,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0.354761064070598,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.852408440419239,0.23874448473769,0.296964680832639,0,0.994147647766298,0,0.222617410045812,0.988823245360557,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.599428828746391,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.467426619694449,1.10961172300523,0,0,0,0.228840068396924,0.604923695052956,0.310874401165561,0,0.159296767163702,0,0.465788870628778,1.65882483136342,0,0,0.150257608997218,0.380805212168795,0,0,0.429642228169954,0.928067519756987,0,0,0,0,0,0.57785949122191,1.07220795687463,0.260994291965212,0,1.15761237161917,0,0.179088841081487,0,0.877136198314828,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0.205325613712494,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0.490296643507811,0,0,0.297046400327086,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,1.00269411196656,0,0,0,1.0247305578054,3.25148368899696,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04541115870403,1.72101972449288,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0.635795703478686,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.20575750823834,0,0.699810938274399,0,0,0,0.239624855491583,0,0,0,0,0,0.336255431980582,0,0,0.128343036279748,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.640695746278505,1.53512174720011,0.64341568457443,2.96836132889982,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,0.309123034943167,0,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.94443704049192,0,0.616067160352178,0,0,0,0.572499546967965,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0.404364963146632,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0.354761064070598,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.852408440419239,0.23874448473769,0.296964680832639,0,0.994147647766298,0,0.222617410045812,0.988823245360557,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.599428828746391,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.467426619694449,1.10961172300523,0,0,0,0.228840068396924,0.604923695052956,0.310874401165561,0,0.159296767163702,0,0.465788870628778,1.65882483136342,0,0,0.150257608997218,0.380805212168795,0,0,0.429642228169954,0.928067519756987,0,0,0,0,0,0.57785949122191,1.07220795687463,0.260994291965212,0,1.15761237161917,0,0.179088841081487,0,0.877136198314828,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0.205325613712494,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0.490296643507811,0,0,0.297046400327086,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr20:48207482..48207483,- | |short_description=p@chr20:48207482..48207483,- | ||
}} | }} |
Latest revision as of 15:03, 28 July 2015
Short description: | p@chr20:48207482..48207483, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48207482..48207483, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 2.32e-13 | 1 |
perirenal adipocyte cell | 2.62e-13 | 1 |
androgen binding protein secreting cell | 3.76e-13 | 1 |
seminiferous tubule epithelial cell | 3.76e-13 | 1 |
Sertoli cell | 3.76e-13 | 1 |
fibroblast of tunica adventitia of artery | 6.07e-13 | 4 |
fibroblast of the aortic adventitia | 6.07e-13 | 4 |
mesothelial cell | 5.09e-10 | 19 |
cortical cell of adrenal gland | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 7.09e-25 | 2 |
mesothelium | 3.76e-13 | 1 |
seminiferous tubule of testis | 3.76e-13 | 1 |
epithelium of male gonad | 3.76e-13 | 1 |
epithelial cord | 3.76e-13 | 1 |
sex cord | 3.76e-13 | 1 |
seminiferous tubule epithelium | 3.76e-13 | 1 |
testis sex cord | 3.76e-13 | 1 |
genital ridge | 3.76e-13 | 1 |
primitive sex cord of indifferent gonad | 3.76e-13 | 1 |
coelomic epithelium | 3.76e-13 | 1 |
artery wall | 6.07e-13 | 4 |
tunica adventitia of artery | 6.07e-13 | 4 |
adventitia | 6.07e-13 | 4 |
tunica adventitia of blood vessel | 6.07e-13 | 4 |
aorta tunica adventitia | 6.07e-13 | 4 |
aorta wall | 6.07e-13 | 4 |
adipose tissue | 3.59e-08 | 14 |
blood vessel layer | 8.94e-08 | 7 |
epithelium of gonad | 3.28e-07 | 2 |