FFCP PHASE1:Hg19::chr20:49838362..49838368,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:49838362..49838368,+ | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr20:49838362..49838368,+ | |||
|id=chr20:49838362..49838368,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.33e-32;5!CL:0002321;1.24e-11;15!CL:0000039;5.86e-07;7!CL:0000586;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.70e-07,7;CL:0000586,5.70e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3347!8.15e-09!1;DOID:4235!1.98e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:169;2.22e-27;6!DOID:3095;5.13e-17;22!DOID:2994;5.13e-17;22!DOID:171;6.65e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.72e-27,6;DOID:3095,5.41e-17,22;DOID:2994,5.41e-17,22;DOID:171,7.51e-17,10 | |||
|ontology_enrichment_uberon=UBERON:0001882!3.79e-08!1;UBERON:0005403!3.79e-08!1;UBERON:0000013!5.94e-07!5;UBERON:0002410!5.94e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.33e-32;5!UBERON:0002410;1.33e-32;5!UBERON:0000010;1.18e-18;8!UBERON:0001052;3.26e-11;4!UBERON:0004907;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.70e-32,5;UBERON:0002410,1.70e-32,5;UBERON:0000010,1.35e-18,8;UBERON:0001052,3.42e-11,4;UBERON:0004907,3.22e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24366922344972,0,1.10086159299127,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3360870263278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:49838362..49838368,+ | |||
}} |
Latest revision as of 15:19, 28 July 2015
Short description: | p@chr20:49838362..49838368, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:49838362..49838368, + |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.70e-07 | 7 |
germ cell | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.70e-32 | 5 |
autonomic nervous system | 1.70e-32 | 5 |
peripheral nervous system | 1.35e-18 | 8 |
rectum | 3.42e-11 | 4 |
lower digestive tract | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.72e-27 | 6 |
germ cell and embryonal cancer | 5.41e-17 | 22 |
germ cell cancer | 5.41e-17 | 22 |
neuroectodermal tumor | 7.51e-17 | 10 |