FFCP PHASE1:Hg19::chr20:5099451..5099464,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5099451..5099464,- | |||
|description=CAGE_peak_at_chr20:5099451..5099464,- | |description=CAGE_peak_at_chr20:5099451..5099464,- | ||
|id=chr20:5099451..5099464,- | |id=chr20:5099451..5099464,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,7.62e-07,2;CL:0000955,7.62e-07,2;CL:0000818,7.62e-07,2;CL:0000954,7.62e-07,2;CL:0000816,7.62e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;3.73e-07;2!UBERON:0008947;8.78e-07;29 | |||
|ontology_enrichment_disease=DOID:14566!5.71e-18!239;DOID:162!3.09e-17!235;DOID:0050687!1.17e-09!143;DOID:305!2.47e-09!106;DOID:2531!1.68e-08!51;DOID:0060083!1.68e-08!51;DOID:1240!4.37e-07!39 | |ontology_enrichment_disease=DOID:14566!5.71e-18!239;DOID:162!3.09e-17!235;DOID:0050687!1.17e-09!143;DOID:305!2.47e-09!106;DOID:2531!1.68e-08!51;DOID:0060083!1.68e-08!51;DOID:1240!4.37e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:4468;4.54e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,8.35e-14,239;DOID:162,2.12e-13,235;DOID:305,4.78e-10,106;DOID:2531,3.80e-08,51;DOID:0060083,3.80e-08,51;DOID:0050687,1.84e-07,143;DOID:4468,7.40e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.16e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.47e-20;9!UBERON:0001557;1.47e-20;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.88e-21,9;UBERON:0001557,2.36e-09,19 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0.572471974262113,0.684372125364421,0.753255837568817,1.52826811495903,1.14940825229924,0.708397031823113,0,0,0,0,0,0.369754010166788,0.154934401160603,0.568676929949686,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0.236482229888585,0,0.645484683583826,1.35426486594342,0.564727018627814,0.272906150057846,0,0,0,0,0,0.598390972864896,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.382273228125229,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0,0.668745981562712,0,0,0,1.44833593950726,0.589211814949674,0.221533894583621,0,1.40900451698243,1.04047478047903,0.493313713811028,0.552700035571697,0.869409257205157,0,0.267540828089713,0,1.13309342697566,0,0.68725489096526,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0.550236083880135,0.626984899610432,0,0,0,0,0,0,0,0,0.625098097988558,0,0.112611480483322,1.53316637465883,0,0.366403487860815,0,0,0,0,0.759783069987479,0.264818361626438,0.573673241497627,0,0,0,0.49333509683432,0,0,0.326923806226917,0.302714855289863,0.576175924479999,0,0,0.570471821544449,0.298897361103602,0.704606991862589,0.647491777472526,0.98315564691574,0,0.982674538494144,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.612975591598039,0,0.113432183160021,0.89694817844431,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0.37223371266318,0,0.389748020644795,0.252433774244115,0.184099797284599,0,0,0.604512589365842,0.339121184620975,0,0,0,1.09776335516636,0.530119073285941,1.04574548582567,0.518305275076852,0.252320850875628,0.72995471815166,0,0,0,0,0,1.8929088006375,2.36018566109342,3.13314338848527,2.31617342738027,1.74303555273925,1.66089433377768,0.674156540800822,1.76599318612811,2.30848294167834,0,0,0,0,1.26755034821831,0,0.590789906681404,11.4780405847809,0.122988438543114,0,0,0,0.804231779293047,0.277765335475589,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.951270761172991,1.58040879591855,0,0,0,0.297262324577456,0,0,0.992425680696705,0,0.290633938513962,0.383382679165211,0,0.264145302039678,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,1.64523988325318,0.300343057843917,0.571652865261156,0,0,0.51336800074665,0.129271715757778,0,0.845302752556,0,0,0,0,0.799266537048298,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.410952645100767,0.179060963239896,0.896681151948218,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,1.91381625495949,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.925258162815933,0.532685175939381,0.164254312027618,1.55776328755086,0,0.362578348774867,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0.524497659837696,0,0.308061348417659,0,0,0.211103257785751,0,0.170093705276516,0.863663664408557,0,0,0,0,0.831076008928724,0,0.877039506583738,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0.924291702687866,0.460511024178389,0.827019434907183,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,1.39453664789186,0,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.823611089208164,0.353437207037059,0,0,0,0.48763373908959,0.974853958525138,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.6196469961995,0.563391205064483,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.427296284509893,0,0.490080431962063,0.185803175125719,0.28853842595289,0.213425530045242,0.797131363644112,2.19537308576098,0.383010740264733,0.211673582723883,0.324621940274555,1.12318871245384,0,1.56679895773023,0,2.03150133361924,1.1241165257259,1.00899853595524,0.425846237690326,2.40453741329035,0,0.223676107892416,0,0.976940477010201,0.835218521685727,1.23087398947712,0,0.99921590399346,0,0.18714054040822,0,0.121360521749513,0.334330152832435,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0.329607748453519,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0.358042349351218,0.511572370226872,0,0,0,0,0.0927680981618513,1.99613798001194,0.260427761085233,0,0,0.5689672414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| ||
|short_description=p@chr20:5099451..5099464,- | |short_description=p@chr20:5099451..5099464,- | ||
}} | }} |
Latest revision as of 15:26, 28 July 2015
Short description: | p@chr20:5099451..5099464, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5099451..5099464, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 7.62e-07 | 2 |
pre-B-II cell | 7.62e-07 | 2 |
transitional stage B cell | 7.62e-07 | 2 |
small pre-B-II cell | 7.62e-07 | 2 |
immature B cell | 7.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.88e-21 | 9 |
upper respiratory tract | 2.36e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 8.35e-14 | 239 |
cancer | 2.12e-13 | 235 |
carcinoma | 4.78e-10 | 106 |
hematologic cancer | 3.80e-08 | 51 |
immune system cancer | 3.80e-08 | 51 |
cell type cancer | 1.84e-07 | 143 |
clear cell adenocarcinoma | 7.40e-07 | 2 |