FFCP PHASE1:Hg19::chr21:44345730..44345747,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002zco.2_5end | |association_with_transcript=0bp_to_uc002zco.2_5end | ||
|cluster_id=chr21:44345730..44345747,- | |||
|coexpression_cluster_id=C925 | |coexpression_cluster_id=C925 | ||
|description=CAGE_peak_1_at_uc002zco.2_5end | |description=CAGE_peak_1_at_uc002zco.2_5end | ||
|id=chr21:44345730..44345747,- | |id=chr21:44345730..44345747,- | ||
|ontology_enrichment_celltype=CL:0000039!2.17e-17!7;CL:0000586!2.17e-17!7;CL:0002322!1.92e-12!5;CL:0002541!4.62e-08!3 | |ontology_enrichment_celltype=CL:0000039!2.17e-17!7;CL:0000586!2.17e-17!7;CL:0002322!1.92e-12!5;CL:0002541!4.62e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.79e-31;7!CL:0000586;1.79e-31;7!CL:0002322;4.21e-22;5!CL:0002541;7.86e-14;3!CL:0002321;3.72e-07;15!CL:0000540;5.95e-07;6!CL:0000404;5.95e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.79e-31,7;CL:0000586,1.79e-31,7;CL:0002322,4.21e-22,5;CL:0002541,7.86e-14,3;CL:0000540,5.83e-07,6;CL:0000031,5.83e-07,6;CL:0000404,5.83e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.62e-07;10!UBERON:0005564;1.62e-07;10!CL:0000031;5.95e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!1.87e-12!22;DOID:2994!1.87e-12!22 | |ontology_enrichment_disease=DOID:3095!1.87e-12!22;DOID:2994!1.87e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;6.26e-12;22!DOID:2994;6.26e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.27e-12,22;DOID:2994,6.27e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.62e-08!3;UBERON:0000920!4.62e-08!3 | |ontology_enrichment_uberon=UBERON:0000476!4.62e-08!3;UBERON:0000920!4.62e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.86e-14;3!UBERON:0000920;7.86e-14;3!UBERON:0000473;2.12e-09;8!UBERON:0002370;3.17e-09;2!UBERON:0005058;3.17e-09;2!UBERON:0009113;3.17e-09;2!UBERON:0004177;7.56e-08;5!UBERON:0005057;7.56e-08;5!UBERON:0005631;4.39e-07;10!UBERON:0000158;4.39e-07;10!UBERON:0003135;7.88e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.86e-14,3;UBERON:0003124,2.31e-10,7;UBERON:0000473,2.12e-09,8;UBERON:0005631,1.29e-07,14;UBERON:0000158,1.29e-07,14;UBERON:0003135,7.88e-07,11 | |||
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| ||
|short_description=p1@uc002zco.2 | |short_description=p1@uc002zco.2 | ||
}} | }} |
Latest revision as of 18:14, 28 July 2015
Short description: | p1@uc002zco.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002zco.2_5end |
Coexpression cluster: | C925_testicular_pancreatic_choriocarcinoma_placenta_H9_chorionic_hepatoblastoma |
Association with transcript: | 0bp_to_uc002zco.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.79e-31 | 7 |
germ cell | 1.79e-31 | 7 |
embryonic stem cell | 4.21e-22 | 5 |
chorionic membrane mesenchymal stem cell | 7.86e-14 | 3 |
neuron | 5.83e-07 | 6 |
neuroblast | 5.83e-07 | 6 |
electrically signaling cell | 5.83e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.86e-14 | 3 |
chorion | 2.31e-10 | 7 |
testis | 2.12e-09 | 8 |
extraembryonic membrane | 1.29e-07 | 14 |
membranous layer | 1.29e-07 | 14 |
male reproductive organ | 7.88e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.27e-12 | 22 |
germ cell cancer | 6.27e-12 | 22 |