FFCP PHASE1:Hg19::chr21:45020673..45020684,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:45020673..45020684,- to FFCP PHASE1:Hg19::chr21:45020673..45020684,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:45020673..45020684,- | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_at_chr21:45020673..45020684,- | |||
|id=chr21:45020673..45020684,- | |||
|ontology_enrichment_celltype=CL:0000066!5.70e-20!254;CL:0002076!5.59e-12!43;CL:0002368!1.33e-11!13;CL:0000220!6.12e-11!246;CL:0002321!1.12e-10!248;CL:0000548!2.72e-10!679;CL:0000004!2.72e-10!679;CL:0000255!2.72e-10!679;CL:0000012!4.84e-10!682;CL:0000223!2.08e-07!59;CL:0000077!2.48e-07!19;CL:0002202!3.56e-07!9;CL:0002632!3.56e-07!9;CL:0000003!6.19e-07!722;CL:0000244!7.12e-07!4;CL:0000731!7.12e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.54e-25;4!CL:0000731;1.54e-25;4!CL:0002368;9.65e-22;13!CL:0002328;2.91e-18;3!CL:0002202;2.94e-16;9!CL:0002632;2.94e-16;9!CL:0002159;1.23e-10;14!CL:0002166;3.91e-09;3!CL:0002541;6.98e-09;3!CL:0000307;6.98e-09;3!CL:0002621;1.23e-08;3!CL:0002076;9.60e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.50e-25,4;CL:0000731,1.50e-25,4;CL:0002368,6.85e-22,13;CL:0002328,1.09e-18,3;CL:0002202,1.88e-16,9;CL:0002632,1.88e-16,9;CL:0002159,1.11e-10,14;CL:0002076,4.71e-10,42;CL:0000066,1.06e-09,253;CL:0002166,3.47e-09,3;CL:0000068,7.72e-09,3;CL:0000069,7.72e-09,3;CL:0000307,7.72e-09,3;CL:0000377,7.72e-09,3;CL:0002541,8.69e-09,3;CL:0002621,9.40e-09,3;CL:0000223,7.04e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;6.98e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.39e-11!14;UBERON:0000158!6.39e-11!14;UBERON:0000065!1.12e-07!53;UBERON:0001737!6.66e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.80e-20;5!UBERON:0004815;2.91e-18;3!UBERON:0002031;2.91e-18;3!UBERON:0000486;7.08e-18;12!UBERON:0005910;4.37e-17;6!UBERON:0002185;3.55e-11;5!UBERON:0007196;1.13e-09;15!UBERON:0001558;1.13e-09;15!UBERON:0005911;3.27e-09;36!UBERON:0003124;6.98e-09;3!UBERON:0000920;6.98e-09;3!UBERON:0001949;1.23e-08;3!UBERON:0000485;4.07e-08;7!UBERON:0007195;4.33e-07;1!UBERON:0001708;4.75e-07;4!UBERON:0008895;4.75e-07;4!UBERON:0006554;8.45e-07;30!UBERON:0001008;8.45e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.77e-20,5;UBERON:0004815,1.09e-18,3;UBERON:0002031,1.09e-18,3;UBERON:0005910,4.29e-17,6;UBERON:0002185,1.99e-11,5;UBERON:0007196,8.70e-10,15;UBERON:0001558,8.70e-10,15;UBERON:0000920,8.69e-09,3;UBERON:0001949,9.40e-09,3;UBERON:0001708,4.35e-07,4;UBERON:0008895,4.35e-07,4;UBERON:0007195,5.19e-07,1 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.436882744260345,0.791300934685361,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,1.83884244895785,2.409647350226,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.378139268656271,0.221729397462564,0.43917392846563,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.662045904066094,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0.184099797284599,0,0.355009592516614,0.302256294682921,0.169560592310488,1.35282597214308,0.818238361772504,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.220587945464788,1.08939722046203,0.71181185733329,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,1.31700342490351,2.24803506515239,0.904760751704678,0.925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,2.81201501960331,2.18376766658517,0.708875486211932,0.806026704325635,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0,0.909382714338778,0,0.30239029332968,0,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0.802025881213139,0.368323955743585,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.447749509444357,0,0,0,0.656029291399411,0,0.206082023295445,0,0,2.29706215198469,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,2.14870389969272,0.960950336825531,4.33883222481586,0.6069466851333,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0.608731130888112,0.6196469961995,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0,2.11688647996127,1.34060455107157,0,0,3.87454835404107,3.36942951335251,4.43430153536676,5.28363820476007,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.890894042497916,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0.108647371922008,2.23300811812344,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.609414446062818,0,0.687944129886466,0,0,0,0,0,0,1.37041924646751,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0.14405479798815,0,0,0.135904206073614,0.627617077873999,0.203996435272644,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0.767660789277781,0,0,0,0,0.864221491201268,0,1.19730191562487,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0.414706207840855,1.06336685823198,0,0.150257608997218,0.761610424337591,0.406870733204662,0.181848659202559,0.214821114084977,0,0.796191777397232,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0.926089897295336,0,0.537266523244462,0,0.438568099157414,0.706756583783524,0,0.168942440653073,0,2.41801239211839,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0,0.577628330751691,0,0,0,0,1.0085253435176,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0.342976018874837,0,0,2.00929529502746,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.436882744260345,0.791300934685361,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,1.83884244895785,2.409647350226,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.378139268656271,0.221729397462564,0.43917392846563,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.662045904066094,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0.184099797284599,0,0.355009592516614,0.302256294682921,0.169560592310488,1.35282597214308,0.818238361772504,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.220587945464788,1.08939722046203,0.71181185733329,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,1.31700342490351,2.24803506515239,0.904760751704678,0.925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,2.81201501960331,2.18376766658517,0.708875486211932,0.806026704325635,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0,0.909382714338778,0,0.30239029332968,0,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0.802025881213139,0.368323955743585,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.447749509444357,0,0,0,0.656029291399411,0,0.206082023295445,0,0,2.29706215198469,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,2.14870389969272,0.960950336825531,4.33883222481586,0.6069466851333,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0.608731130888112,0.6196469961995,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0,2.11688647996127,1.34060455107157,0,0,3.87454835404107,3.36942951335251,4.43430153536676,5.28363820476007,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.890894042497916,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0.108647371922008,2.23300811812344,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.609414446062818,0,0.687944129886466,0,0,0,0,0,0,1.37041924646751,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0.14405479798815,0,0,0.135904206073614,0.627617077873999,0.203996435272644,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0.767660789277781,0,0,0,0,0.864221491201268,0,1.19730191562487,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0.414706207840855,1.06336685823198,0,0.150257608997218,0.761610424337591,0.406870733204662,0.181848659202559,0.214821114084977,0,0.796191777397232,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0.926089897295336,0,0.537266523244462,0,0.438568099157414,0.706756583783524,0,0.168942440653073,0,2.41801239211839,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0,0.577628330751691,0,0,0,0,1.0085253435176,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0.342976018874837,0,0,2.00929529502746,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:45020673..45020684,- | |||
}} | }} |
Latest revision as of 18:19, 28 July 2015
Short description: | p@chr21:45020673..45020684, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:45020673..45020684, - |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.50e-25 | 4 |
urothelial cell | 1.50e-25 | 4 |
respiratory epithelial cell | 6.85e-22 | 13 |
bronchial epithelial cell | 1.09e-18 | 3 |
epithelial cell of tracheobronchial tree | 1.88e-16 | 9 |
epithelial cell of lower respiratory tract | 1.88e-16 | 9 |
general ecto-epithelial cell | 1.11e-10 | 14 |
endo-epithelial cell | 4.71e-10 | 42 |
epithelial cell | 1.06e-09 | 253 |
epithelial cell of Malassez | 3.47e-09 | 3 |
duct epithelial cell | 7.72e-09 | 3 |
branched duct epithelial cell | 7.72e-09 | 3 |
tracheal epithelial cell | 7.72e-09 | 3 |
tracheoblast | 7.72e-09 | 3 |
chorionic membrane mesenchymal stem cell | 8.69e-09 | 3 |
gingival epithelial cell | 9.40e-09 | 3 |
endodermal cell | 7.04e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.77e-20 | 5 |
lower respiratory tract epithelium | 1.09e-18 | 3 |
epithelium of bronchus | 1.09e-18 | 3 |
transitional epithelium | 4.29e-17 | 6 |
bronchus | 1.99e-11 | 5 |
tracheobronchial tree | 8.70e-10 | 15 |
lower respiratory tract | 8.70e-10 | 15 |
egg chorion | 8.69e-09 | 3 |
gingival epithelium | 9.40e-09 | 3 |
jaw skeleton | 4.35e-07 | 4 |
splanchnocranium | 4.35e-07 | 4 |
stroma of bone marrow | 5.19e-07 | 1 |