FFCP PHASE1:Hg19::chr21:47410794..47410799,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:47410794..47410799,+ | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr21:47410794..47410799,+ | |||
|id=chr21:47410794..47410799,+ | |||
|ontology_enrichment_celltype=CL:0002583!4.48e-18!2;CL:0000057!8.40e-15!75;CL:0002568!8.24e-10!1;CL:0002620!2.28e-09!23;CL:0002552!5.12e-08!5;CL:0002274!7.25e-08!5;CL:0000457!7.25e-08!5;CL:0002191!7.25e-08!5;CL:0000097!7.25e-08!5;CL:0000831!7.25e-08!5;CL:0002028!7.25e-08!5;CL:0002334!5.15e-07!12;CL:0000055!5.84e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002363;5.04e-34;2!CL:0000346;4.09e-23;3!CL:1000428;4.09e-23;3!CL:0002559;1.83e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,5.04e-34,2;CL:0000008,5.04e-34,2;CL:0000346,4.09e-23,3;CL:1000428,4.09e-23,3;CL:0002559,1.83e-14,5;CL:0000333,3.05e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000008;5.04e-34;2 | |||
|ontology_enrichment_disease=DOID:178!3.10e-10!1;DOID:326!3.10e-10!1;DOID:3978!3.10e-10!1;DOID:3394!3.10e-10!1;DOID:5844!3.10e-10!1;DOID:17!5.89e-08!5;DOID:450!5.89e-08!5;DOID:66!5.89e-08!5;DOID:423!5.89e-08!5;DOID:0080000!5.89e-08!5;DOID:11722!5.89e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.25e-11!45;UBERON:0002416!2.25e-11!45;UBERON:0003102!2.66e-11!95;UBERON:0002072!8.91e-08!5;UBERON:0002097!1.88e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;5.04e-34;2!UBERON:0001777;5.04e-34;2!UBERON:0000412;4.09e-23;3!UBERON:0001992;4.09e-23;3!UBERON:0003891;8.69e-18;4!UBERON:0000964;8.69e-18;4!UBERON:0010409;8.69e-18;4!UBERON:0002073;1.83e-14;5!UBERON:0002067;1.21e-08;9!UBERON:0010313;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,5.04e-34,2;UBERON:0001777,5.04e-34,2;UBERON:0000412,4.09e-23,3;UBERON:0001992,4.09e-23,3;UBERON:0003891,8.69e-18,4;UBERON:0000964,8.69e-18,4;UBERON:0010409,8.69e-18,4;UBERON:0004348,8.69e-18,4;UBERON:0005427,8.69e-18,4;UBERON:0002073,1.83e-14,5;UBERON:0005086,1.83e-14,5;UBERON:0005085,1.25e-09,31;UBERON:0002067,1.21e-08,9;UBERON:0004016,1.21e-08,9;UBERON:0010083,1.21e-08,9;UBERON:0010313,6.13e-08,10;UBERON:0002342,6.13e-08,10;UBERON:0005062,6.13e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0,0.309977343527296,0,0,0,0,0,0,0.831192346452549,0,0,0,0,0.179389635688862,0,0,0,0.515262646192195,0.257640540045629,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11980435583874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69258397364331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:47410794..47410799,+ | |||
}} |
Latest revision as of 18:43, 28 July 2015
Short description: | p@chr21:47410794..47410799, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47410794..47410799, + |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 5.04e-34 | 2 |
migratory cranial neural crest cell | 5.04e-34 | 2 |
hair follicle dermal papilla cell | 4.09e-23 | 3 |
stem cell of epidermis | 4.09e-23 | 3 |
hair follicle cell | 1.83e-14 | 5 |
migratory neural crest cell | 3.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 5.04e-34 | 2 |
substantia propria of cornea | 5.04e-34 | 2 |
dermal papilla | 4.09e-23 | 3 |
papillary layer of dermis | 4.09e-23 | 3 |
stroma | 8.69e-18 | 4 |
cornea | 8.69e-18 | 4 |
eye surface | 8.69e-18 | 4 |
optic eminence | 8.69e-18 | 4 |
corneal primordium | 8.69e-18 | 4 |
hair follicle | 1.83e-14 | 5 |
hair follicle placode | 1.83e-14 | 5 |
ectodermal placode | 1.25e-09 | 31 |
dermis | 1.21e-08 | 9 |
dermatome | 1.21e-08 | 9 |
future dermis | 1.21e-08 | 9 |
neural crest-derived structure | 6.13e-08 | 10 |
neural crest | 6.13e-08 | 10 |
neural fold | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.73e-08 | 10 |