FFCP PHASE1:Hg19::chr22:23237558..23237573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:23237558..23237573,+ | |||
|coexpression_cluster_id=C218 | |||
|description=CAGE_peak_at_chr22:23237558..23237573,+ | |description=CAGE_peak_at_chr22:23237558..23237573,+ | ||
|id=chr22:23237558..23237573,+ | |id=chr22:23237558..23237573,+ | ||
|ontology_enrichment_celltype=CL:0000236!8.86e-33!14;CL:0000945!7.12e-28!24;CL:0000826!7.12e-28!24;CL:0000838!7.23e-11!52;CL:0000542!1.35e-10!53;CL:0000051!1.35e-10!53 | |ontology_enrichment_celltype=CL:0000236!8.86e-33!14;CL:0000945!7.12e-28!24;CL:0000826!7.12e-28!24;CL:0000838!7.23e-11!52;CL:0000542!1.35e-10!53;CL:0000051!1.35e-10!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.40e-37;13!CL:0000945;6.43e-24;24!CL:0000542;1.88e-08;53!CL:0000785;2.21e-07;1!CL:0000819;2.21e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.80e-34,14;CL:0000945,6.51e-24,24;CL:0000826,6.51e-24,24;CL:0000838,4.34e-10,52;CL:0000542,7.26e-10,53;CL:0000051,7.26e-10,53;CL:0000819,2.35e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.32e-08;7!CL:0000051;1.88e-08;53!UBERON:0006595;3.94e-08;86!UBERON:0001045;1.10e-07;1!UBERON:0006298;1.47e-07;1!UBERON:0009143;2.21e-07;1!UBERON:0005754;2.21e-07;1!UBERON:0006242;3.73e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!6.12e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.21e-07;1!DOID:8675;2.21e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.35e-07,1;DOID:8675,2.35e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-26!115;UBERON:0004177!2.02e-11!7;UBERON:0002106!6.71e-11!3;UBERON:0004854!6.71e-11!3;UBERON:0009034!6.71e-11!3;UBERON:0002095!6.71e-11!3;UBERON:0004782!6.71e-11!3;UBERON:0003281!6.71e-11!3;UBERON:0009664!6.71e-11!3;UBERON:0002296!6.71e-11!3;UBERON:0005602!6.71e-11!3;UBERON:0001179!6.71e-11!3;UBERON:0006293!6.71e-11!3;UBERON:0003408!8.29e-08!10;UBERON:0001829!1.05e-07!2;UBERON:0004921!7.03e-07!129;UBERON:0004185!7.03e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.86e-09;3!UBERON:0004921;2.54e-09;33!UBERON:0002372;6.81e-08;1!UBERON:0001961;6.81e-08;1!UBERON:0001744;6.81e-08;1!UBERON:0001042;6.81e-08;1!UBERON:0001735;6.81e-08;1!UBERON:0000029;8.00e-08;1!UBERON:0001154;1.10e-07;1!UBERON:0001153;1.10e-07;1!UBERON:0009854;1.10e-07;1!UBERON:0001736;1.47e-07;1!UBERON:0002171;1.47e-07;1!UBERON:0006518;1.47e-07;1!UBERON:0008949;1.47e-07;1!UBERON:0000101;1.47e-07;1!UBERON:0002167;1.47e-07;1!UBERON:0000998;2.21e-07;1!UBERON:0006868;2.21e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.75e-17,114;UBERON:0002106,1.74e-09,3;UBERON:0004854,1.74e-09,3;UBERON:0009034,1.74e-09,3;UBERON:0002095,1.74e-09,3;UBERON:0004782,1.74e-09,3;UBERON:0003281,1.74e-09,3;UBERON:0009664,1.74e-09,3;UBERON:0002296,1.74e-09,3;UBERON:0005602,1.74e-09,3;UBERON:0001179,1.74e-09,3;UBERON:0006293,1.74e-09,3;UBERON:0005409,3.57e-08,25;UBERON:0002372,6.59e-08,1;UBERON:0001961,6.59e-08,1;UBERON:0001744,6.59e-08,1;UBERON:0001735,6.59e-08,1;UBERON:0000029,8.00e-08,1;UBERON:0001154,1.18e-07,1;UBERON:0001153,1.18e-07,1;UBERON:0001045,1.18e-07,1;UBERON:0001736,1.25e-07,1;UBERON:0006298,1.25e-07,1;UBERON:0002171,1.61e-07,1;UBERON:0006518,1.61e-07,1;UBERON:0008949,1.61e-07,1;UBERON:0000101,1.61e-07,1;UBERON:0002167,1.61e-07,1;UBERON:0004921,2.41e-07,118;UBERON:0000998,2.50e-07,1;UBERON:0006868,2.50e-07,1 | |||
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| ||
|short_description=p@chr22:23237558..23237573,+ | |short_description=p@chr22:23237558..23237573,+ | ||
}} | }} |
Latest revision as of 19:26, 28 July 2015
Short description: | p@chr22:23237558..23237573, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:23237558..23237573, + |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.80e-34 | 14 |
lymphocyte of B lineage | 6.51e-24 | 24 |
pro-B cell | 6.51e-24 | 24 |
lymphoid lineage restricted progenitor cell | 4.34e-10 | 52 |
lymphocyte | 7.26e-10 | 53 |
common lymphoid progenitor | 7.26e-10 | 53 |
B-1 B cell | 2.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.75e-17 | 114 |
spleen | 1.74e-09 | 3 |
gastrointestinal system mesentery | 1.74e-09 | 3 |
stomach region | 1.74e-09 | 3 |
mesentery | 1.74e-09 | 3 |
gastrointestinal system serosa | 1.74e-09 | 3 |
mesentery of stomach | 1.74e-09 | 3 |
gut mesentery | 1.74e-09 | 3 |
dorsal mesentery | 1.74e-09 | 3 |
dorsal mesogastrium | 1.74e-09 | 3 |
peritoneal cavity | 1.74e-09 | 3 |
spleen primordium | 1.74e-09 | 3 |
gastrointestinal system | 3.57e-08 | 25 |
tonsil | 6.59e-08 | 1 |
mucosa-associated lymphoid tissue | 6.59e-08 | 1 |
lymphoid tissue | 6.59e-08 | 1 |
tonsillar ring | 6.59e-08 | 1 |
lymph node | 8.00e-08 | 1 |
vermiform appendix | 1.18e-07 | 1 |
caecum | 1.18e-07 | 1 |
midgut | 1.18e-07 | 1 |
submandibular gland | 1.25e-07 | 1 |
submandibular gland primordium | 1.25e-07 | 1 |
lower lobe of right lung | 1.61e-07 | 1 |
right lung lobe | 1.61e-07 | 1 |
lower lobe of lung | 1.61e-07 | 1 |
lobe of lung | 1.61e-07 | 1 |
right lung | 1.61e-07 | 1 |
subdivision of digestive tract | 2.41e-07 | 118 |
seminal vesicle | 2.50e-07 | 1 |
seminal fluid secreting gland | 2.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.35e-07 | 1 |
lymphosarcoma | 2.35e-07 | 1 |