FFCP PHASE1:Hg19::chr22:30653971..30653987,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:30653971..30653987,-
|short_description=p@chr22:30653971..30653987,-
|description=CAGE_peak_at_chr22:30653971..30653987,-
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:30653971..30653987,- | |||
|description=CAGE_peak_at_chr22:30653971..30653987,- | |||
|id=chr22:30653971..30653987,- | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-18!254;CL:0002149!2.16e-09!6;CL:0002255!2.16e-09!6;CL:0002274!1.51e-07!5;CL:0000457!1.51e-07!5;CL:0002191!1.51e-07!5;CL:0000097!1.51e-07!5;CL:0000831!1.51e-07!5;CL:0002028!1.51e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.96e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.47e-09;10!UBERON:0007687;6.47e-09;10 | |||
|ontology_enrichment_disease=DOID:305!4.59e-40!106;DOID:0050687!1.81e-36!143;DOID:162!3.09e-25!235;DOID:14566!3.57e-24!239;DOID:299!3.82e-18!25;DOID:3001!2.16e-09!6 | |||
|ontology_enrichment_disease_v019=DOID:299;1.15e-21;25!DOID:3493;6.42e-09;2!DOID:4468;2.16e-08;2!DOID:4929;2.89e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.09e-21,25;DOID:305,9.70e-20,106;DOID:0050687,4.65e-18,143;DOID:162,6.24e-14,235;DOID:14566,1.88e-13,239;DOID:0050686,5.83e-10,137;DOID:3493,6.56e-09,2;DOID:4468,2.17e-08,2;DOID:4929,3.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!5.36e-13!155;UBERON:0001555!5.36e-13!155;UBERON:0007026!5.36e-13!155;UBERON:0004921!8.61e-13!129;UBERON:0004185!8.61e-13!129;UBERON:0005409!5.29e-12!35;UBERON:0004119!6.25e-12!169;UBERON:0000925!6.25e-12!169;UBERON:0006595!6.25e-12!169;UBERON:0001737!4.98e-11!9;UBERON:0002108!4.99e-11!14;UBERON:0000160!1.90e-10!27;UBERON:0000077!2.76e-10!130;UBERON:0002075!6.94e-10!18;UBERON:0005177!1.33e-09!107;UBERON:0002114!9.20e-09!12;UBERON:0000489!9.61e-09!32;UBERON:0002113!1.61e-08!27;UBERON:0003918!1.61e-08!27;UBERON:0005095!1.61e-08!27;UBERON:0007687!1.61e-08!27;UBERON:0001041!2.70e-08!98;UBERON:0006554!4.87e-08!44;UBERON:0000062!6.44e-08!511;UBERON:0001008!9.63e-08!45;UBERON:0003886!1.48e-07!63;UBERON:0001264!1.87e-07!10;UBERON:0003922!1.87e-07!10;UBERON:0003923!1.87e-07!10;UBERON:0003924!1.87e-07!10;UBERON:0003921!1.87e-07!10;UBERON:0002294!2.65e-07!7;UBERON:0001173!2.65e-07!7;UBERON:0004912!2.65e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;6.49e-13;10!UBERON:0002075;5.97e-12;18!UBERON:0000945;6.17e-07;5!UBERON:0010039;6.17e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,4.69e-13,10;UBERON:0002075,5.14e-12,18;UBERON:0005177,1.02e-10,101;UBERON:0003886,3.50e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0.818718450173537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.614843499851882,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,1.32352767278873,0.653638332277218,1.18635309555548,0.539325232640658,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,1.05658120815871,0.829312462163088,1.15295962733569,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0,0.261435451024901,0,0,0.325378394664303,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,1.92283328029452,2.88743956579008,0,0,0,0,0,3.79200805722352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0.284136146806413,0,0,0,0,0,0,2.14245036494787,0,0,0,0,0,0,0,0.449341755736634,5.9076987642951,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,12.6598838716816,1.46909527343233,0.282706142867882,0,2.98578579323551,0.973033209536731,0,0,0,0,0,0,0,0,0.391329237864179,1.69946265673865,0,2.41981432097328,0,0,0,0,3.98792323624311,5.95785520575898,8.47618879699508,5.97362148864794,1.70765727617876,5.40831224751241,0.520679215005393,0.0979923974143777,1.56706571844725,0,0.171986032471617,0.387025325156341,0.438535902517113,0.574808199372465,0,0,0,0.959293472527256,0,0,0.195551382734803,0.480952921509202,3.41524791582964,0.19980960958213,1.29681375438695,1.03082936549324,0,0.864328787928898,0.869767748958028,0.235694034616795,1.49494626680975,2.196659772559,0.815985741090574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0.315222829196793,0.314727528809989,0.528001682597033,8.06793026997802,0,0,0,5.085370753095,0,0,0,0,0,0.340776043570843,0,0,0,0,0,8.21216821844781,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65977677773876,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,7.94348707622635,1.38172136692479,0,0,0,0,0,0.327609848846413,0.491545817507439,2.74705760366215,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0,0,0.808679663052368,0,1.3807198521202,0,0,0.40341013740704,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,5.55511052154651,2.66955364540966,0,0,0.560544326627578,0,9.71674160483796,1.9110067515482,0,0,6.50951982061501,0,0,0,0,0,0,0,0,0,8.7060610046739,0.93061915699296,0.955538938977433,4.02679554472052,7.7538684556042,8.29041889879432,0,0,0,0,0,0,0,0,0,0,1.69783147837478,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,2.16651690060754,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0.459474497674225,0,0,0,0,0,0,0,0,0,0.33639558774184,0.25458863311266,0.606351566874658,0,0,0,0.286888821570705,0,2.11648498388534,0.960546112899439,0,2.33545525477126,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0.818718450173537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.614843499851882,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,1.32352767278873,0.653638332277218,1.18635309555548,0.539325232640658,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,1.05658120815871,0.829312462163088,1.15295962733569,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0,0.261435451024901,0,0,0.325378394664303,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,1.92283328029452,2.88743956579008,0,0,0,0,0,3.79200805722352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0.284136146806413,0,0,0,0,0,0,2.14245036494787,0,0,0,0,0,0,0,0.449341755736634,5.9076987642951,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,12.6598838716816,1.46909527343233,0.282706142867882,0,2.98578579323551,0.973033209536731,0,0,0,0,0,0,0,0,0.391329237864179,1.69946265673865,0,2.41981432097328,0,0,0,0,3.98792323624311,5.95785520575898,8.47618879699508,5.97362148864794,1.70765727617876,5.40831224751241,0.520679215005393,0.0979923974143777,1.56706571844725,0,0.171986032471617,0.387025325156341,0.438535902517113,0.574808199372465,0,0,0,0.959293472527256,0,0,0.195551382734803,0.480952921509202,3.41524791582964,0.19980960958213,1.29681375438695,1.03082936549324,0,0.864328787928898,0.869767748958028,0.235694034616795,1.49494626680975,2.196659772559,0.815985741090574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0.315222829196793,0.314727528809989,0.528001682597033,8.06793026997802,0,0,0,5.085370753095,0,0,0,0,0,0.340776043570843,0,0,0,0,0,8.21216821844781,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65977677773876,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,7.94348707622635,1.38172136692479,0,0,0,0,0,0.327609848846413,0.491545817507439,2.74705760366215,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0,0,0.808679663052368,0,1.3807198521202,0,0,0.40341013740704,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,5.55511052154651,2.66955364540966,0,0,0.560544326627578,0,9.71674160483796,1.9110067515482,0,0,6.50951982061501,0,0,0,0,0,0,0,0,0,8.7060610046739,0.93061915699296,0.955538938977433,4.02679554472052,7.7538684556042,8.29041889879432,0,0,0,0,0,0,0,0,0,0,1.69783147837478,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,2.16651690060754,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0.459474497674225,0,0,0,0,0,0,0,0,0,0.33639558774184,0.25458863311266,0.606351566874658,0,0,0,0.286888821570705,0,2.11648498388534,0.960546112899439,0,2.33545525477126,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr22:30653971..30653987,- | |||
}} | }} |
Latest revision as of 20:05, 28 July 2015
Short description: | p@chr22:30653971..30653987, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:30653971..30653987, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.96e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
pancreas | 4.69e-13 | 10 |
viscus | 5.14e-12 | 18 |
trunk region element | 1.02e-10 | 101 |
body cavity precursor | 3.50e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.09e-21 | 25 |
carcinoma | 9.70e-20 | 106 |
cell type cancer | 4.65e-18 | 143 |
cancer | 6.24e-14 | 235 |
disease of cellular proliferation | 1.88e-13 | 239 |
organ system cancer | 5.83e-10 | 137 |
signet ring cell adenocarcinoma | 6.56e-09 | 2 |
clear cell adenocarcinoma | 2.17e-08 | 2 |
tubular adenocarcinoma | 3.48e-08 | 2 |