FFCP PHASE1:Hg19::chr22:33256373..33256380,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:33256373..33256380,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr22:33256373..33256380,+ | |||
|id=chr22:33256373..33256380,+ | |||
|ontology_enrichment_celltype=CL:0002334!8.90e-10!12;CL:0000057!9.13e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.51e-12;3!CL:0000632;4.89e-11;3!CL:0002581;6.72e-09;1!CL:0002379;6.72e-09;1!CL:0002537;2.66e-07;5!CL:0000349;6.36e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.28e-12,3;CL:0000632,4.20e-11,3;CL:0002379,3.88e-09,1;CL:0002581,5.31e-09,1;CL:0002537,2.70e-07,5;CL:0000349,6.36e-07,19;CL:0000062,9.56e-07,11;CL:0000375,9.56e-07,11;CL:0000335,9.56e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;8.39e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;2.30e-09;1!DOID:3369;3.17e-09;1!DOID:3620;6.72e-09;1!DOID:3565;6.72e-09;1!DOID:2513;6.72e-09;1!DOID:3571;6.72e-09;1!DOID:2394;7.76e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,2.04e-09,1;DOID:3369,2.82e-09,1;DOID:3620,3.88e-09,1;DOID:3565,3.88e-09,1;DOID:2513,4.91e-09,1;DOID:3571,6.22e-09,1;DOID:2394,7.45e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.69e-13;10!UBERON:0000158;4.69e-13;10!UBERON:0003124;9.51e-12;3!UBERON:0000920;9.51e-12;3!UBERON:0002171;3.17e-09;1!UBERON:0006518;3.17e-09;1!UBERON:0008949;3.17e-09;1!UBERON:0000101;3.17e-09;1!UBERON:0002167;3.17e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.28e-12,3;UBERON:0005631,2.31e-09,14;UBERON:0000158,2.31e-09,14;UBERON:0002171,3.58e-09,1;UBERON:0006518,3.58e-09,1;UBERON:0008949,3.58e-09,1;UBERON:0000101,3.58e-09,1;UBERON:0002167,3.58e-09,1 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0.795285947051099,0.973269740605272,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0.423863802319124,1.20036438433761,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0.757301322732344,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0.928735856063958,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0,0.126995788584338,0,0,0,0.205654985406647,0.901029173531752,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.630809660135739,0.468565659970853,0.300946099727719,2.27407504055985,0,0,1.10621501125022,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,1.02341449813341,0.804269605718038,1.48418066444991,0.771048469013278,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0.34444334449382,0,0,0,0,0,0,0,1.13733384070897,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0.984043937099117,0.650756789328606,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0,0,8.98671874871233,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.487426979262569,3.16950440270266,0,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0.844430541190656,0.329294892959902,0,0,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,2.14870036263921,0,4.60741053148848,0,0.140669416410513,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,3.19001159731919,0.732780747214898,14.9249737285218,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0.799238438328521,0,0,0,0,0,0.471388069233591,0,0,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0,0,0,0.858452096273142,0.223171457441873,0.0671834724867263,1.44119953416961,0,0,0,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0.226624183040251,0.146552233678082,0,0.258565912723101,0,0,0,0.106787412567695,0,2.07119527673598,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0.122026264901963,0,1.14681839138014,0,0,0,0.124980407962107,0,0.285465333544967,1.88212655758537,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,1.65882483136342,1.86089200190596,1.04349012362347,0.300515217994437,1.14241563650639,0.406870733204662,0,0,0,0.796191777397232,0,0,0.336749488765919,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0.318004350653419,0,0,0.352675943690684,0,0.0642292250964595,0,0,0.41023272848151,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0,0.709618961301111,0,0.342976018874837,0,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,3.56846940844415,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.190941474834495,0.404234377916439,0.435433495793923,0,0,0,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr22:33256373..33256380,+ | |||
}} |
Latest revision as of 20:29, 28 July 2015
Short description: | p@chr22:33256373..33256380, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:33256373..33256380, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.28e-12 | 3 |
hepatic stellate cell | 4.20e-11 | 3 |
meningothelial cell | 3.88e-09 | 1 |
perirenal preadipocyte | 5.31e-09 | 1 |
amnion mesenchymal stem cell | 2.70e-07 | 5 |
extraembryonic cell | 6.36e-07 | 19 |
osteoblast | 9.56e-07 | 11 |
osteoprogenitor cell | 9.56e-07 | 11 |
mesenchyme condensation cell | 9.56e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.28e-12 | 3 |
extraembryonic membrane | 2.31e-09 | 14 |
membranous layer | 2.31e-09 | 14 |
lower lobe of right lung | 3.58e-09 | 1 |
right lung lobe | 3.58e-09 | 1 |
lower lobe of lung | 3.58e-09 | 1 |
lobe of lung | 3.58e-09 | 1 |
right lung | 3.58e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 2.04e-09 | 1 |
peripheral primitive neuroectodermal tumor | 2.82e-09 | 1 |
central nervous system cancer | 3.88e-09 | 1 |
meningioma | 3.88e-09 | 1 |
basal cell carcinoma | 4.91e-09 | 1 |
liver cancer | 6.22e-09 | 1 |
ovarian cancer | 7.45e-09 | 14 |