FFCP PHASE1:Hg19::chr22:45944516..45944530,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:45944516..45944530,+ | |||
|coexpression_cluster_id=C518 | |||
|description=CAGE_peak_at_chr22:45944516..45944530,+ | |description=CAGE_peak_at_chr22:45944516..45944530,+ | ||
|id=chr22:45944516..45944530,+ | |id=chr22:45944516..45944530,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.02e-17!180;CL:0000057!1.82e-14!75 | |ontology_enrichment_celltype=CL:0000055!1.02e-17!180;CL:0000057!1.82e-14!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.03e-12,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!8.59e-15!347;UBERON:0003102!9.96e-12!95;UBERON:0000468!4.23e-11!659;UBERON:0000475!8.92e-11!365;UBERON:0000064!2.02e-09!219;UBERON:0004119!7.52e-09!169;UBERON:0000925!7.52e-09!169;UBERON:0006595!7.52e-09!169;UBERON:0001007!1.41e-07!155;UBERON:0001555!1.41e-07!155;UBERON:0007026!1.41e-07!155;UBERON:0001737!3.57e-07!9;UBERON:0004923!3.60e-07!57;UBERON:0000922!3.74e-07!612;UBERON:0003104!3.85e-07!238;UBERON:0009142!3.85e-07!238;UBERON:0005256!4.74e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.13e-09;9!UBERON:0001557;5.13e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.40e-11,99;UBERON:0001737,5.36e-09,9;UBERON:0004119,7.58e-09,160;UBERON:0000925,7.58e-09,160;UBERON:0006595,7.58e-09,160;UBERON:0001007,5.42e-08,145;UBERON:0001555,5.42e-08,145;UBERON:0007026,5.42e-08,145;UBERON:0004923,2.60e-07,66;UBERON:0000162,5.03e-07,14;UBERON:0001353,5.03e-07,14;UBERON:0000163,5.03e-07,14;UBERON:0006866,5.03e-07,14;UBERON:0000164,5.03e-07,14;UBERON:0000931,5.03e-07,14;UBERON:0000161,9.15e-07,36 | |||
|phase1_expression=2.36181893051724,7.70761886007539,1.9733616573436,10.007329835313,3.5756887554183,20.0637860543085,2.53299878168311,10.7392378482561,17.2382514611893,0.491467873003018,1.39560233594486,0,1.05506791291381,4.45558870656168,6.2965501388304,3.36162573225888,1.20538905604795,1.46062018077475,2.43966399395253,1.23121058076788,10.2000345622127,3.44800193625897,0.85870796139317,3.69560947696787,4.01736446703369,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,3.97583067623023,2.00535164254356,12.0222610737484,0,0.973269740605272,1.70162670895322,4.65631734671384,2.28370442802128,0.851363990735132,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,1.2663051166458,0.264818361626438,28.3968254541326,4.25602058638028,1.12135520028461,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,3.93529311876822,4.03323147135999,1.87457145467037,9.98912245857026,0.570471821544449,14.3470733329729,3.64046945795671,3.23745888736263,3.51127016755621,3.87892925384297,7.61572767332961,15.1888898328375,14.2560342873846,25.7157606449699,0.910161361938026,1.43723628363248,0.841680569770331,6.75640007308606,1.38532057742091,2.63386572528503,5.21029252858333,5.10809400282429,0.453728732640084,1.25572744982203,3.20336083227851,2.33125091275518,1.80054657650641,2.47326070172253,0.772921620136887,0.744467425326359,1.85653965465393,1.16924406193438,1.00973509697646,3.68199594569197,34.2689640455881,1.42003837006646,0.705264687593482,2.54340888465731,0,0.272746120590835,0.286804595389004,2.31750041646231,1.98794652482228,5.34492137199785,2.59152637538426,4.79409616663694,0.36497735907583,0,34.7350106624158,1.38134921352481,64.0827740684131,74.3535866119673,14.433429604861,12.8124364459357,9.15841913557232,14.3382164552112,13.2906460896368,6.64357733511071,9.30336026305134,11.5770664423954,13.0814033361773,0.738155454624648,0,0.4115740113314,8.82052268313252,0,0,0,0,3.93563003337963,2.74508496477641,0.878002283269004,0,0.703702806881416,1.38882667737794,1.3032332212413,6.23960871167747,4.3299402607582,1.39116485970092,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.358234090811393,1.16253575405585,0,0,0,0.414656231081544,0.144119953416961,0,0.190493682876507,0.763976851116555,0,5.13217338068116,1.7480673759565,0.901029173531752,0.285826432630578,1.34557301214433,4.79556075716608,3.0802080044799,0.387815147273333,10.7296933755565,2.535908257668,0.531876233169741,4.16029747645464,0.771622122786426,0,1.0656887160644,1.57275793023962,10.8524321078289,1.64648067356154,0.65147236858747,1.42156779497018,0,0.301439377059586,0,0.299918973546171,0,0,0,0.718874566474748,3.44585807502342,0,0.579125226670317,2.26023954805422,0.895304816199478,0,0,0,0,1.01637849688985,0,3.09315525111078,1.17261385734044,2.55175500661265,0,0,0,10.6741597795652,8.50289885801451,2.71265023699736,11.0224556611328,26.5859193307771,11.6699787125112,9.01988895443892,1.20378439891088,25.0148254461583,14.4862299809507,0.664225598535437,0.553107505625109,10.6866845795742,6.65723935373318,14.0688803762451,0,0,0,0.303127571446259,8.32177197552485,5.74541557326393,0.248107807818777,0.306923946576125,4.49056151092918,1.92208723883551,2.04682899626681,2.2519548960105,7.42090332224955,3.70103265126373,1.06537035187876,0.328508624055237,7.78881643775432,1.51073491997947,6.76812917713084,1.20303882181971,2.20994373446151,9.29997030133315,39.5137834574576,68.5780690237788,0.451199612907412,0.462092022626489,0.784349769176855,0,1.05551628892876,0,0,0.647747748306418,1.54227252690289,0.812839312631559,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.325378394664303,6.28550171051106,0.824125183365091,0,0,0.650060246036521,0,1.06337790121334,0.462145851343933,1.22802939780904,0.827019434907183,2.14840489736547,5.65565106265491,1.19317278382541,1.33548053470106,0.330569830721956,0.192190067365106,0.127612712494584,0,0.929691098594572,8.49993336442728,0,0.924100740528266,0,0,0.18532421910392,0.143124886741991,0.744316738719335,0,0.190630193923825,3.83846686967001,14.5499255931533,0.95460974377781,1.56989728039846,1.43897966066652,6.86342574340137,1.64937363283961,0,0,0,1.46290121726877,1.70599442741899,0,5.86949619054339,19.9381659054735,0,0,1.32687795048244,0.438450885253763,2.31510213706675,22.9563163216321,0,1.239293992399,0,0.860468113224309,0.982490410131212,0,2.48332744849418,31.8772529299473,29.9658352593511,1.89736586882858,9.79817216685952,0.0962221127255121,0,0,6.3076346520442,0.43050537267123,3.36942951335251,2.66058092122005,0.918893600827838,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80921266106924,0.242721043499027,0,0,0.23874448473769,0,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| ||
|short_description=p@chr22:45944516..45944530,+ | |short_description=p@chr22:45944516..45944530,+ | ||
}} | }} |
Latest revision as of 22:05, 28 July 2015
Short description: | p@chr22:45944516..45944530, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:45944516..45944530, + |
Coexpression cluster: | C518_sacrococcigeal_Prostate_Mesenchymal_Fibroblast_tridermal_Hair_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.03e-12 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.40e-11 | 99 |
larynx | 5.36e-09 | 9 |
endoderm-derived structure | 7.58e-09 | 160 |
endoderm | 7.58e-09 | 160 |
presumptive endoderm | 7.58e-09 | 160 |
digestive system | 5.42e-08 | 145 |
digestive tract | 5.42e-08 | 145 |
primitive gut | 5.42e-08 | 145 |
organ component layer | 2.60e-07 | 66 |
cloaca | 5.03e-07 | 14 |
anal region | 5.03e-07 | 14 |
embryonic cloaca | 5.03e-07 | 14 |
terminal part of digestive tract | 5.03e-07 | 14 |
primitive urogenital sinus | 5.03e-07 | 14 |
proctodeum | 5.03e-07 | 14 |
orifice | 9.15e-07 | 36 |