FFCP PHASE1:Hg19::chr2:113483700..113483732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=284958 | |EntrezGene=entrezgene:284958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=27678 | |HGNC=HGNC:27678 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-87bp_to_ENST00000462854_5end | |association_with_transcript=-87bp_to_ENST00000462854_5end | ||
|cluster_id=chr2:113483700..113483732,+ | |||
|description=CAGE_peak_1_at_NT5DC4_5end | |description=CAGE_peak_1_at_NT5DC4_5end | ||
|id=chr2:113483700..113483732,+ | |id=chr2:113483700..113483732,+ |
Revision as of 23:20, 28 July 2015
Short description: | p1@NT5DC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NT5DC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -87bp_to_ENST00000462854_5end |
EntrezGene: | 284958 |
HGNC: | 27678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@NT5DC4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.88e-12 | 58 |
epithelial cell | 1.16e-09 | 253 |
hepatocyte | 6.42e-07 | 12 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.07e-11 | 25 |
subdivision of digestive tract | 8.73e-10 | 118 |
intestine | 1.43e-09 | 17 |
epithelial sac | 4.85e-09 | 25 |
mucosa | 1.09e-08 | 20 |
sac | 1.17e-08 | 26 |
digestive system | 2.53e-08 | 145 |
digestive tract | 2.53e-08 | 145 |
primitive gut | 2.53e-08 | 145 |
endoderm-derived structure | 3.86e-08 | 160 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.66e-20 | 106 |
cell type cancer | 1.29e-13 | 143 |
adenocarcinoma | 3.09e-12 | 25 |
signet ring cell adenocarcinoma | 5.64e-12 | 2 |
squamous cell carcinoma | 7.34e-09 | 14 |
cancer | 7.84e-09 | 235 |
disease of cellular proliferation | 1.56e-08 | 239 |
cystadenocarcinoma | 8.34e-07 | 1 |
mucinous cystadenocarcinoma | 8.34e-07 | 1 |
Showing 1 to 9 of 9 entries