FFCP PHASE1:Hg19::chr2:12454437..12454450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000412606_5end | |association_with_transcript=0bp_to_ENST00000412606_5end | ||
|cluster_id=chr2:12454437..12454450,+ | |||
|coexpression_cluster_id=C897 | |||
|description=CAGE_peak_1_at_ENST00000412606_5end | |description=CAGE_peak_1_at_ENST00000412606_5end | ||
|id=chr2:12454437..12454450,+ | |id=chr2:12454437..12454450,+ | ||
|ontology_enrichment_celltype=CL:0000148!6.96e-16!10;CL:0000541!6.96e-16!10;CL:0000147!5.40e-11!14;CL:0002567!6.83e-11!3;CL:0002274!3.45e-10!5;CL:0000457!3.45e-10!5;CL:0002191!3.45e-10!5;CL:0000097!3.45e-10!5;CL:0000831!3.45e-10!5;CL:0002028!3.45e-10!5;CL:0000710!2.46e-07!20 | |ontology_enrichment_celltype=CL:0000148!6.96e-16!10;CL:0000541!6.96e-16!10;CL:0000147!5.40e-11!14;CL:0002567!6.83e-11!3;CL:0002274!3.45e-10!5;CL:0000457!3.45e-10!5;CL:0002191!3.45e-10!5;CL:0000097!3.45e-10!5;CL:0000831!3.45e-10!5;CL:0002028!3.45e-10!5;CL:0000710!2.46e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.01e-74;10!CL:0000147;5.31e-53;14!CL:0002567;3.06e-46;3!CL:0000710;4.81e-37;20!CL:0000075;2.25e-27;27!CL:0002077;3.68e-19;34!CL:0002566;1.21e-16;1!CL:0000047;8.09e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.01e-74,10;CL:0000541,3.01e-74,10;CL:0000147,5.31e-53,14;CL:0002567,3.06e-46,3;CL:0000710,4.81e-37,20;CL:0000075,2.25e-27,27;CL:0002077,1.13e-21,34;CL:0000333,4.62e-17,41;CL:0002566,1.21e-16,1;CL:0000133,2.00e-15,59;CL:0000221,1.32e-12,72 | |||
|ontology_enrichment_development_v019=CL:0000133;4.94e-09;59 | |||
|ontology_enrichment_disease=DOID:1909!5.87e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.92e-32;2!DOID:5662;2.63e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.92e-32,2;DOID:5662,2.25e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-20!57;UBERON:0005068!1.35e-20!57;UBERON:0006241!1.35e-20!57;UBERON:0007135!1.35e-20!57;UBERON:0005743!1.76e-20!86;UBERON:0001017!3.70e-20!82;UBERON:0000073!6.96e-18!94;UBERON:0001016!6.96e-18!94;UBERON:0007023!2.28e-16!115;UBERON:0002616!6.30e-16!59;UBERON:0003075!6.47e-16!86;UBERON:0007284!6.47e-16!86;UBERON:0002346!6.30e-15!90;UBERON:0000955!3.95e-14!69;UBERON:0006238!3.95e-14!69;UBERON:0002020!3.10e-13!34;UBERON:0003528!3.10e-13!34;UBERON:0001893!5.27e-13!34;UBERON:0002780!4.49e-12!41;UBERON:0001890!4.49e-12!41;UBERON:0006240!4.49e-12!41;UBERON:0003080!1.03e-11!42;UBERON:0002791!1.38e-11!33;UBERON:0003076!3.18e-11!15;UBERON:0003057!3.18e-11!15;UBERON:0001869!3.79e-10!32;UBERON:0001872!1.10e-09!5;UBERON:0006331!1.46e-09!3;UBERON:0004121!1.68e-09!169;UBERON:0000988!2.57e-09!3;UBERON:0000924!4.09e-09!173;UBERON:0006601!4.09e-09!173;UBERON:0002619!7.95e-09!22;UBERON:0002298!9.38e-09!8;UBERON:0003056!3.51e-08!61;UBERON:0004733!4.50e-08!12;UBERON:0002028!4.50e-08!12;UBERON:0007277!4.50e-08!12;UBERON:0002308!5.65e-08!9;UBERON:0000125!5.65e-08!9;UBERON:0002680!6.30e-08!9;UBERON:0001895!6.30e-08!9;UBERON:0010092!6.30e-08!9;UBERON:0001950!1.03e-07!20;UBERON:0000956!1.28e-07!25;UBERON:0000203!1.28e-07!25;UBERON:0000153!1.61e-07!129;UBERON:0007811!1.61e-07!129;UBERON:0004732!2.11e-07!13;UBERON:0000033!2.31e-07!123;UBERON:0002148!5.85e-07!2;UBERON:0009662!5.85e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000412606 | |short_description=p1@ENST00000412606 | ||
}} | }} |
Latest revision as of 00:01, 29 July 2015
Short description: | p1@ENST00000412606 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000412606_5end |
Coexpression cluster: | C897_melanoma_Melanocyte_CD14_Macrophage_retina_myxofibrosarcoma_Monocytederived |
Association with transcript: | 0bp_to_ENST00000412606_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.01e-74 | 10 |
melanoblast | 3.01e-74 | 10 |
pigment cell | 5.31e-53 | 14 |
light melanocyte | 3.06e-46 | 3 |
neurecto-epithelial cell | 4.81e-37 | 20 |
columnar/cuboidal epithelial cell | 2.25e-27 | 27 |
ecto-epithelial cell | 1.13e-21 | 34 |
migratory neural crest cell | 4.62e-17 | 41 |
dark melanocyte | 1.21e-16 | 1 |
neurectodermal cell | 2.00e-15 | 59 |
ectodermal cell | 1.32e-12 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.92e-32 | 2 |
pleomorphic carcinoma | 2.25e-16 | 1 |