FFCP PHASE1:Hg19::chr2:153381962..153381984,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:153381962..153381984,+ | |||
|coexpression_cluster_id=C420 | |coexpression_cluster_id=C420 | ||
|description=CAGE_peak_at_chr2:153381962..153381984,+ | |description=CAGE_peak_at_chr2:153381962..153381984,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002551!4.64e-09!6;CL:0002573!5.09e-09!2;CL:0000708!4.68e-08!3;CL:0000594!4.86e-08!3 | |ontology_enrichment_celltype=CL:0002551!4.64e-09!6;CL:0002573!5.09e-09!2;CL:0000708!4.68e-08!3;CL:0000594!4.86e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002573;4.99e-45;2!CL:0000083;1.38e-09;4!CL:0000243;7.61e-09;15!CL:0000125;7.61e-09;15!CL:0000095;5.16e-08;17 | |ontology_enrichment_celltype_v019=CL:0002573;4.99e-45;2!CL:0000083;1.38e-09;4!CL:0000243;7.61e-09;15!CL:0000125;7.61e-09;15!CL:0000095;5.16e-08;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002573,5.00e-45,2;CL:0000083,1.32e-09,4;CL:0000243,7.61e-09,15;CL:0000125,7.61e-09,15;CL:0000030,7.61e-09,15;CL:0000339,7.61e-09,15;CL:0000095,5.16e-08,17;CL:0000123,5.16e-08,17 | |||
|ontology_enrichment_development_v019=CL:0000339;7.61e-09;15 | |ontology_enrichment_development_v019=CL:0000339;7.61e-09;15 | ||
|ontology_enrichment_disease=DOID:0060085!3.17e-07!1;DOID:3165!3.17e-07!1;DOID:0060121!3.17e-07!1;DOID:2438!3.17e-07!1;DOID:4418!3.17e-07!1;DOID:5662!3.36e-07!1;DOID:1115!7.12e-07!20 | |ontology_enrichment_disease=DOID:0060085!3.17e-07!1;DOID:3165!3.17e-07!1;DOID:0060121!3.17e-07!1;DOID:2438!3.17e-07!1;DOID:4418!3.17e-07!1;DOID:5662!3.36e-07!1;DOID:1115!7.12e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:4074;8.34e-18;2!DOID:4905;8.34e-18;2!DOID:3498;8.34e-18;2!DOID:1793;1.38e-09;4!DOID:170;8.25e-07;6 | |ontology_enrichment_disease_v019=DOID:4074;8.34e-18;2!DOID:4905;8.34e-18;2!DOID:3498;8.34e-18;2!DOID:1793;1.38e-09;4!DOID:170;8.25e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4074,7.67e-18,2;DOID:4905,7.67e-18,2;DOID:3498,7.67e-18,2;DOID:1793,1.32e-09,4;DOID:170,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001264!1.10e-09!10;UBERON:0003922!1.10e-09!10;UBERON:0003923!1.10e-09!10;UBERON:0003924!1.10e-09!10;UBERON:0003921!1.10e-09!10;UBERON:0001045!8.28e-09!11;UBERON:0003210!4.68e-08!3;UBERON:0002114!1.85e-07!12 | |ontology_enrichment_uberon=UBERON:0001264!1.10e-09!10;UBERON:0003922!1.10e-09!10;UBERON:0003923!1.10e-09!10;UBERON:0003924!1.10e-09!10;UBERON:0003921!1.10e-09!10;UBERON:0001045!8.28e-09!11;UBERON:0003210!4.68e-08!3;UBERON:0002114!1.85e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;3.23e-30;10!UBERON:0002075;3.39e-17;18!UBERON:0000010;8.39e-16;8!UBERON:0000949;2.34e-07;43 | |ontology_enrichment_uberon_v019=UBERON:0001264;3.23e-30;10!UBERON:0002075;3.39e-17;18!UBERON:0000010;8.39e-16;8!UBERON:0000949;2.34e-07;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,3.07e-30,10;UBERON:0002075,3.30e-17,18;UBERON:0000010,8.39e-16,8;UBERON:0000949,2.49e-07,45;UBERON:0002323,3.48e-07,46;UBERON:0004458,8.74e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42780379534093,0,0,0,0,0,0,0,0.661983911750998,1.56966459203613,2.38944859545918,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54996002191696,3.40853619036631,0,0,0,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42780379534093,0,0,0,0,0,0,0,0.661983911750998,1.56966459203613,2.38944859545918,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54996002191696,3.40853619036631,0,0,0,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:153381962..153381984,+ | |short_description=p@chr2:153381962..153381984,+ | ||
}} | }} |
Latest revision as of 01:28, 29 July 2015
Short description: | p@chr2:153381962..153381984, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:153381962..153381984, + |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 5.00e-45 | 2 |
epithelial cell of pancreas | 1.32e-09 | 4 |
glial cell (sensu Vertebrata) | 7.61e-09 | 15 |
glial cell | 7.61e-09 | 15 |
glioblast | 7.61e-09 | 15 |
glioblast (sensu Vertebrata) | 7.61e-09 | 15 |
neuron associated cell | 5.16e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.16e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
pancreas | 3.07e-30 | 10 |
viscus | 3.30e-17 | 18 |
peripheral nervous system | 8.39e-16 | 8 |
endocrine system | 2.49e-07 | 45 |
body cavity | 3.48e-07 | 46 |
body cavity or lining | 8.74e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 7.67e-18 | 2 |
pancreatic carcinoma | 7.67e-18 | 2 |
pancreatic ductal adenocarcinoma | 7.67e-18 | 2 |
pancreatic cancer | 1.32e-09 | 4 |
endocrine gland cancer | 8.02e-07 | 6 |