FFCP PHASE1:Hg19::chr2:159842523..159842528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:159842523..159842528,+ | |||
|coexpression_cluster_id=C116 | |coexpression_cluster_id=C116 | ||
|description=CAGE_peak_at_chr2:159842523..159842528,+ | |description=CAGE_peak_at_chr2:159842523..159842528,+ | ||
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|ontology_enrichment_celltype=CL:0000945!3.40e-40!24;CL:0000826!3.40e-40!24;CL:0000838!1.59e-28!52;CL:0000542!5.66e-28!53;CL:0000051!5.66e-28!53;CL:0000946!1.04e-16!1;CL:0000786!1.04e-16!1;CL:0000980!1.04e-16!1;CL:0002087!7.22e-12!119;CL:0002031!2.35e-11!124;CL:0000738!5.92e-10!140;CL:0000785!5.08e-09!2;CL:0000955!5.08e-09!2;CL:0000818!5.08e-09!2;CL:0000954!5.08e-09!2;CL:0000816!5.08e-09!2;CL:0002032!2.67e-08!165;CL:0000837!2.67e-08!165;CL:0000037!6.38e-08!172;CL:0000566!6.38e-08!172;CL:0000988!1.98e-07!182 | |ontology_enrichment_celltype=CL:0000945!3.40e-40!24;CL:0000826!3.40e-40!24;CL:0000838!1.59e-28!52;CL:0000542!5.66e-28!53;CL:0000051!5.66e-28!53;CL:0000946!1.04e-16!1;CL:0000786!1.04e-16!1;CL:0000980!1.04e-16!1;CL:0002087!7.22e-12!119;CL:0002031!2.35e-11!124;CL:0000738!5.92e-10!140;CL:0000785!5.08e-09!2;CL:0000955!5.08e-09!2;CL:0000818!5.08e-09!2;CL:0000954!5.08e-09!2;CL:0000816!5.08e-09!2;CL:0002032!2.67e-08!165;CL:0000837!2.67e-08!165;CL:0000037!6.38e-08!172;CL:0000566!6.38e-08!172;CL:0000988!1.98e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.20e-34;24!CL:0000946;8.34e-34;1!CL:0000786;8.34e-34;1!CL:0000542;6.58e-11;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.20e-34;24!CL:0000946;8.34e-34;1!CL:0000786;8.34e-34;1!CL:0000542;6.58e-11;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.20e-34,24;CL:0000826,1.20e-34,24;CL:0000946,9.85e-34,1;CL:0000786,9.85e-34,1;CL:0000980,9.85e-34,1;CL:0000838,3.32e-23,52;CL:0000542,8.88e-23,53;CL:0000051,8.88e-23,53;CL:0000785,1.27e-17,2;CL:0000955,1.27e-17,2;CL:0000818,1.27e-17,2;CL:0000954,1.27e-17,2;CL:0000816,1.27e-17,2;CL:0000817,3.24e-12,3;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;1.17e-17;2!CL:0000051;6.58e-11;53 | |ontology_enrichment_development_v019=CL:0000954;1.17e-17;2!CL:0000051;6.58e-11;53 | ||
|ontology_enrichment_disease=DOID:0060058!4.70e-25!10;DOID:4960!4.72e-17!1;DOID:0070004!4.72e-17!1;DOID:630!8.86e-17!1;DOID:0050177!8.86e-17!1;DOID:0050427!8.86e-17!1;DOID:2355!1.21e-16!1;DOID:2531!1.13e-10!51;DOID:0060083!1.13e-10!51;DOID:74!5.49e-09!2 | |ontology_enrichment_disease=DOID:0060058!4.70e-25!10;DOID:4960!4.72e-17!1;DOID:0070004!4.72e-17!1;DOID:630!8.86e-17!1;DOID:0050177!8.86e-17!1;DOID:0050427!8.86e-17!1;DOID:2355!1.21e-16!1;DOID:2531!1.13e-10!51;DOID:0060083!1.13e-10!51;DOID:74!5.49e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:4960;1.84e-34;1!DOID:0070004;1.84e-34;1!DOID:630;8.34e-34;1!DOID:0050177;8.34e-34;1!DOID:0050427;8.34e-34;1!DOID:0060058;2.27e-30;10 | |ontology_enrichment_disease_v019=DOID:4960;1.84e-34;1!DOID:0070004;1.84e-34;1!DOID:630;8.34e-34;1!DOID:0050177;8.34e-34;1!DOID:0050427;8.34e-34;1!DOID:0060058;2.27e-30;10 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,1.84e-34,1;DOID:0070004,1.84e-34,1;DOID:630,7.06e-34,1;DOID:0050177,7.06e-34,1;DOID:0050427,7.06e-34,1;DOID:0060058,2.27e-30,10;DOID:2531,5.59e-11,51;DOID:0060083,5.59e-11,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,3.12772311472327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62811873847405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5051137593098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,3.12772311472327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62811873847405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5051137593098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | ||
|short_description=p@chr2:159842523..159842528,+ | |short_description=p@chr2:159842523..159842528,+ | ||
}} | }} |
Latest revision as of 01:44, 29 July 2015
Short description: | p@chr2:159842523..159842528, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:159842523..159842528, + |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.20e-34 | 24 |
pro-B cell | 1.20e-34 | 24 |
antibody secreting cell | 9.85e-34 | 1 |
plasma cell | 9.85e-34 | 1 |
plasmablast | 9.85e-34 | 1 |
lymphoid lineage restricted progenitor cell | 3.32e-23 | 52 |
lymphocyte | 8.88e-23 | 53 |
common lymphoid progenitor | 8.88e-23 | 53 |
mature B cell | 1.27e-17 | 2 |
pre-B-II cell | 1.27e-17 | 2 |
transitional stage B cell | 1.27e-17 | 2 |
small pre-B-II cell | 1.27e-17 | 2 |
immature B cell | 1.27e-17 | 2 |
precursor B cell | 3.24e-12 | 3 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.84e-34 | 1 |
myeloma | 1.84e-34 | 1 |
genetic disease | 7.06e-34 | 1 |
monogenic disease | 7.06e-34 | 1 |
xeroderma pigmentosum | 7.06e-34 | 1 |
lymphoma | 2.27e-30 | 10 |
hematologic cancer | 5.59e-11 | 51 |
immune system cancer | 5.59e-11 | 51 |