FFCP PHASE1:Hg19::chr2:160118440..160118443,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:160118440..160118443,+ | |||
|description=CAGE_peak_at_chr2:160118440..160118443,+ | |description=CAGE_peak_at_chr2:160118440..160118443,+ | ||
|id=chr2:160118440..160118443,+ | |id=chr2:160118440..160118443,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;6.44e-12;2!CL:0000222;4.19e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.46e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.87e-18!143;DOID:305!1.32e-16!106;DOID:14566!4.35e-16!239;DOID:162!6.85e-16!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.59e-13;14!DOID:3571;5.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.21e-13,143;DOID:1749,4.84e-13,14;DOID:162,8.52e-12,235;DOID:14566,1.98e-11,239;DOID:305,1.19e-10,106;DOID:3571,4.58e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0005409!5.02e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002075;4.24e-10;18!UBERON:0002110;3.18e-08;3!UBERON:0002294;1.83e-07;7!UBERON:0001173;1.83e-07;7!UBERON:0002423;2.11e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002075,7.98e-10,18;UBERON:0002110,5.44e-08,3;UBERON:0006242,5.44e-08,3;UBERON:0009497,2.66e-07,25;UBERON:0000015,2.66e-07,25;UBERON:0002423,2.66e-07,25;UBERON:0006235,2.66e-07,25;UBERON:0004161,2.66e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8089173141853,1.06729878806013,0,0,0,0.732186172644509,0,0,0.714397826272638,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.794455084879313,0,0,0,0,0.24666754841716,1.24484414159907,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0.57978255948989,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0,0.6970372701606,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,1.52362600021443,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0.422008249231538,0.667852230137435,0.329607748453519,1.68900326502395,0,0.552567831062295,0,0.715880777515084,0,0.311039587661807,0.359473404589307,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.219385397153973,0.871507708151921,0,0.153900517007594,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,2.2251121057253,0.421996129056054,0.652931232636591,0,0,0,0.265372693510018,0,1.48260564340311,0,0.104421949505455,0.269604531922708,0,0,0,1.17398771359254,0.242780379534093,0.394584402849391,0,0,0.126373159256976,0,0,1.32930774541437,0.330991955875499,0,1.19472429772959,1.13843818411917,0.138674673013139,0,1.37189356380129,0.435296032902013,0,0.687944129886466,0.290268993867255,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0,0,0.316553979779393,2.15106521008283,1.04206466326994,0,0.19980960958213,0.288180834308212,0,0,0.14405479798815,1.98804056904692,0.707082103850386,0.543616824294456,0.523014231561666,2.03996435272644,0.288950589901519,0,0.684526894459965,0,0.859530882839914,0,0,0.916641696046735,0,0.199679000498991,0,0,0.0671834724867263,2.52209918479682,2.32991899054908,0,0,0,3.14967940847196,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0.670869375198532,0.551639951094387,0,0.422401346077626,0.35857467866569,1.34340638123612,0,0,0,0,0.864221491201268,0,0,1.14929529049075,0.170388021785422,0,0,0,0.258565912723101,0.66116300871345,0.684347351537318,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.942324577501406,0,0,0.3755727921195,0,0.221858103073705,0,1.52183498429854,0,0,0.570930667089935,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0.464033759878494,0,0,0,0,3.78554694685953,1.34833881285112,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.737318726261158,0.211312123358627,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0.323474434190045,0,0.54604819096007,0.169732529954025,1.70059936081346,0.123935764259002,0,0,0,0,0,1.2249819094128,0.0642292250964595,0,0.478901577171454,0,0.252071696221718,0,0,1.42769420259154,1.66851121451744,1.1796972334774,0.183428598521679,0.462102664601353,0,0,0.994581110581374,0.150420656698515,0,0,0,0.655087670040387,1.18284868973636,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0.638812138197976,0,2.01770233331294,0,0,0,0,0.685952037749674,0,0,0.118193840883968,0.222462803784138,0,0,1.68163297988273,0.913158720509496,0.647782773655864,0,0.0714765441766563,0,0,1.91244099532837,0.801711364730253,0.207216164163037,0,0.691259661814092,0,0.118332000730565,0,0.423387050190929,1.3746412112643,0,0,0,0.294450700845729,0.121917924982269,0,0,0,0,0,0.795803100645473,0,0.5647304101948,0,0,0.540219106755613,0.874238242015829,0,0,0.707029641304878,0,0.594092800654172,0.4226557275834,0,0,0,0.199882311849858,1.24987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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8089173141853,1.06729878806013,0,0,0,0.732186172644509,0,0,0.714397826272638,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.794455084879313,0,0,0,0,0.24666754841716,1.24484414159907,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0.57978255948989,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0,0.6970372701606,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,1.52362600021443,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0.422008249231538,0.667852230137435,0.329607748453519,1.68900326502395,0,0.552567831062295,0,0.715880777515084,0,0.311039587661807,0.359473404589307,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.219385397153973,0.871507708151921,0,0.153900517007594,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,2.2251121057253,0.421996129056054,0.652931232636591,0,0,0,0.265372693510018,0,1.48260564340311,0,0.104421949505455,0.269604531922708,0,0,0,1.17398771359254,0.242780379534093,0.394584402849391,0,0,0.126373159256976,0,0,1.32930774541437,0.330991955875499,0,1.19472429772959,1.13843818411917,0.138674673013139,0,1.37189356380129,0.435296032902013,0,0.687944129886466,0.290268993867255,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0,0,0.316553979779393,2.15106521008283,1.04206466326994,0,0.19980960958213,0.288180834308212,0,0,0.14405479798815,1.98804056904692,0.707082103850386,0.543616824294456,0.523014231561666,2.03996435272644,0.288950589901519,0,0.684526894459965,0,0.859530882839914,0,0,0.916641696046735,0,0.199679000498991,0,0,0.0671834724867263,2.52209918479682,2.32991899054908,0,0,0,3.14967940847196,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0.670869375198532,0.551639951094387,0,0.422401346077626,0.35857467866569,1.34340638123612,0,0,0,0,0.864221491201268,0,0,1.14929529049075,0.170388021785422,0,0,0,0.258565912723101,0.66116300871345,0.684347351537318,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.942324577501406,0,0,0.3755727921195,0,0.221858103073705,0,1.52183498429854,0,0,0.570930667089935,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0.464033759878494,0,0,0,0,3.78554694685953,1.34833881285112,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.737318726261158,0.211312123358627,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0.323474434190045,0,0.54604819096007,0.169732529954025,1.70059936081346,0.123935764259002,0,0,0,0,0,1.2249819094128,0.0642292250964595,0,0.478901577171454,0,0.252071696221718,0,0,1.42769420259154,1.66851121451744,1.1796972334774,0.183428598521679,0.462102664601353,0,0,0.994581110581374,0.150420656698515,0,0,0,0.655087670040387,1.18284868973636,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0.638812138197976,0,2.01770233331294,0,0,0,0,0.685952037749674,0,0,0.118193840883968,0.222462803784138,0,0,1.68163297988273,0.913158720509496,0.647782773655864,0,0.0714765441766563,0,0,1.91244099532837,0.801711364730253,0.207216164163037,0,0.691259661814092,0,0.118332000730565,0,0.423387050190929,1.3746412112643,0,0,0,0.294450700845729,0.121917924982269,0,0,0,0,0,0.795803100645473,0,0.5647304101948,0,0,0.540219106755613,0.874238242015829,0,0,0.707029641304878,0,0.594092800654172,0.4226557275834,0,0,0,0.199882311849858,1.24987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| ||
|short_description=p@chr2:160118440..160118443,+ | |short_description=p@chr2:160118440..160118443,+ | ||
}} | }} |
Latest revision as of 01:45, 29 July 2015
Short description: | p@chr2:160118440..160118443, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:160118440..160118443, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.46e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
viscus | 7.98e-10 | 18 |
gallbladder | 5.44e-08 | 3 |
gall bladder primordium | 5.44e-08 | 3 |
epithelium of foregut-midgut junction | 2.66e-07 | 25 |
anatomical boundary | 2.66e-07 | 25 |
hepatobiliary system | 2.66e-07 | 25 |
foregut-midgut junction | 2.66e-07 | 25 |
septum transversum | 2.66e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.21e-13 | 143 |
squamous cell carcinoma | 4.84e-13 | 14 |
cancer | 8.52e-12 | 235 |
disease of cellular proliferation | 1.98e-11 | 239 |
carcinoma | 1.19e-10 | 106 |
liver cancer | 4.58e-07 | 1 |