FFCP PHASE1:Hg19::chr2:174983006..174983046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:174983006..174983046,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr2:174983006..174983046,- | |description=CAGE_peak_at_chr2:174983006..174983046,- | ||
|id=chr2:174983006..174983046,- | |id=chr2:174983006..174983046,- | ||
|ontology_enrichment_celltype=CL:0000077!2.77e-13!19;CL:0000076!2.10e-11!62;CL:0000213!9.58e-10!57;CL:0000215!9.58e-10!57;CL:0000222!1.10e-08!119;CL:0000548!4.00e-07!679;CL:0000004!4.00e-07!679;CL:0000255!4.00e-07!679;CL:0000012!5.76e-07!682 | |ontology_enrichment_celltype=CL:0000077!2.77e-13!19;CL:0000076!2.10e-11!62;CL:0000213!9.58e-10!57;CL:0000215!9.58e-10!57;CL:0000222!1.10e-08!119;CL:0000548!4.00e-07!679;CL:0000004!4.00e-07!679;CL:0000255!4.00e-07!679;CL:0000012!5.76e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002097;2.01e-40;2!CL:0000174;2.38e-27;3!CL:0002541;2.91e-27;3!CL:0000349;3.39e-17;19!CL:0002537;3.95e-17;5!CL:0000077;5.03e-10;19!CL:0000150;8.46e-10;9!CL:0000163;8.46e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,2.01e-40,2;CL:0000174,2.38e-27,3;CL:0002541,3.56e-27,3;CL:0000349,3.61e-17,19;CL:0002537,3.95e-17,5;CL:0000077,4.72e-10,19;CL:0000150,8.46e-10,9;CL:0000163,8.46e-10,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:170;3.25e-14;6!DOID:4556;5.73e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:170,3.25e-14,6;DOID:4556,5.93e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.90e-07!14;UBERON:0000158!7.90e-07!14 | |ontology_enrichment_uberon=UBERON:0005631!7.90e-07!14;UBERON:0000158!7.90e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.26e-32;10!UBERON:0000158;3.26e-32;10!UBERON:0002369;2.38e-27;3!UBERON:0001235;2.38e-27;3!UBERON:0006858;2.38e-27;3!UBERON:0003124;2.91e-27;3!UBERON:0000920;2.91e-27;3!UBERON:0000478;1.06e-13;24!UBERON:0000305;1.59e-12;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.38e-27,3;UBERON:0001235,2.38e-27,3;UBERON:0006858,2.38e-27,3;UBERON:0000920,3.56e-27,3;UBERON:0005631,3.96e-23,14;UBERON:0000158,3.96e-23,14;UBERON:0000478,1.11e-13,24;UBERON:0000305,1.59e-12,7;UBERON:0003124,2.98e-12,7;UBERON:0004871,4.43e-11,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.301586917234893,0,0.651616610620649,0,0,0,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0.644521469209642,0.435050081742686,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,9.31103490476991,0.296964680832639,20.8869277427478,0,0.140669416410513,0.890469640183247,0,0,0,0,0,0.920418142519393,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0.435296032902013,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21760706690754,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0,0.889811221596536,0.457680136793847,0.302461847526478,0,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,3.65977677773876,1.28664954824955,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0.358177682162975,1.54400723580486,0.219284049578707,0.530067437837643,0.38582807654183,0.675769762612291,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34558235096736,0.190941474834495,0,0,0,0,0,0,0,0.426909383510862,0,0.0898252021065869,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.301586917234893,0,0.651616610620649,0,0,0,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0.644521469209642,0.435050081742686,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,9.31103490476991,0.296964680832639,20.8869277427478,0,0.140669416410513,0.890469640183247,0,0,0,0,0,0.920418142519393,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0.435296032902013,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21760706690754,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0,0.889811221596536,0.457680136793847,0.302461847526478,0,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,3.65977677773876,1.28664954824955,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0.358177682162975,1.54400723580486,0.219284049578707,0.530067437837643,0.38582807654183,0.675769762612291,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34558235096736,0.190941474834495,0,0,0,0,0,0,0,0.426909383510862,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr2:174983006..174983046,- | |short_description=p@chr2:174983006..174983046,- | ||
}} | }} |
Latest revision as of 02:37, 29 July 2015
Short description: | p@chr2:174983006..174983046, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:174983006..174983046, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 2.01e-40 | 2 |
steroid hormone secreting cell | 2.38e-27 | 3 |
chorionic membrane mesenchymal stem cell | 3.56e-27 | 3 |
extraembryonic cell | 3.61e-17 | 19 |
amnion mesenchymal stem cell | 3.95e-17 | 5 |
mesothelial cell | 4.72e-10 | 19 |
glandular epithelial cell | 8.46e-10 | 9 |
endocrine cell | 8.46e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.38e-27 | 3 |
adrenal cortex | 2.38e-27 | 3 |
adrenal/interrenal gland | 2.38e-27 | 3 |
egg chorion | 3.56e-27 | 3 |
extraembryonic membrane | 3.96e-23 | 14 |
membranous layer | 3.96e-23 | 14 |
extraembryonic structure | 1.11e-13 | 24 |
amnion | 1.59e-12 | 7 |
chorion | 2.98e-12 | 7 |
somatic layer of lateral plate mesoderm | 4.43e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 3.25e-14 | 6 |
lung large cell carcinoma | 5.93e-08 | 3 |